KEGG   Comamonas thiooxydans: CtCNB1_0921
Entry
CtCNB1_0921       CDS       T01109                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ctt  Comamonas thiooxydans
Pathway
ctt03030  DNA replication
ctt03410  Base excision repair
ctt03420  Nucleotide excision repair
ctt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CtCNB1_0921
   03410 Base excision repair
    CtCNB1_0921
   03420 Nucleotide excision repair
    CtCNB1_0921
   03440 Homologous recombination
    CtCNB1_0921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctt03032]
    CtCNB1_0921
   03400 DNA repair and recombination proteins [BR:ctt03400]
    CtCNB1_0921
Enzymes [BR:ctt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CtCNB1_0921
DNA replication proteins [BR:ctt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CtCNB1_0921
DNA repair and recombination proteins [BR:ctt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CtCNB1_0921
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CtCNB1_0921
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: ACY31667
LinkDB
Position
1032094..1034889
AA seq 931 aa
MSNSKTLVLVDGSSYLYRAYHAMPDLRAIPGDPASPATGAIRGMVNMMQALRKDVQADYA
VCVFDASGPTFRDEMYTEYKATRSPMPDDLRSQIEPIHEVVQLLGWKVVAVPGVEADDVI
ATLAQTAAAQGIQVIVSSGDKDLSQLVGEHVTIIDTMNGKKRDVAGVTAEFGVPPALMID
YQALVGDTVDNVPGVTKVGPKTAAKWLEEHGSLDNLIARAADIKGVAGQNLRDAIASGQL
ALSRQLVTMKTDCDLSSYISGLPQLDAITLAEPDSAALAPFYEKYGFKGLVRTLGAAAAE
AKAAKTDSAQGGLFDADDAAATEVAVTAQQRDVLYTTILNEAQLDEWLAKISAAELTALD
TETDSLDEMVARIVGISFSVAVGEAAYIPLRHEGMDVPEQLNMDMVLARLKPWLEDAGKK
KLGQHVKYDQHVFANHGITVRGYAHDTMLQSYVLEADRPHNLTSLALRHVSRSGISYEDL
CGKGKNQIPFAQVSVDKAAAYSCEDSDQTLDVHNTLWPRIQAHAGLLHIYELEMQTSEAL
FRIERNGVSIDAGELARQSNDLGARILKLEEEAYEIAGQPFNLSSPKQLGEIFFDKLGMP
VVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYTDKLAQMALPSDGRVHT
HYAQAVAVTGRLSSNDPNLQNIPVRTPEGRRVREAFVAPEGKLIASADYSQIELRIMAHL
SGDEALLSAFKNGLDVHRATAAEVFGVSVDEVSSEQRRYAKVINFGLIYGMSSFGLAKNL
GIETKAAAAYIDKYFQRYPGVKRYMDQTVELAHAQGYVETVFGRRLVLPEINGGNGPRKK
AAERAAINAPMQGTAADLIKKAMVAVQARLDAEKPEVLVIMQVHDELVFELPEAARDWVQ
AEIPSIMAGVADLSVPLLAEIGFGSSWEKAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgagcaattccaagaccctggtgctggtggacggctccagctacctctaccgcgcctac
catgccatgcccgacctgcgggcgattccaggcgacccggccagcccggccacgggcgcc
atccgcggcatggtgaacatgatgcaggcgctgaggaaggatgtgcaggccgattacgcc
gtctgcgtgttcgacgcctcgggcccgaccttccgcgacgagatgtacaccgagtacaag
gccacgcgctcgcccatgcccgatgacttgcgcagccagatcgagcccatccacgaggtg
gttcagctgctgggctggaaggtggtggccgtgcccggcgtggaagccgatgacgtgatc
gccacgctggcgcagaccgcggcggcccagggcatacaggtcatcgtctccagcggtgac
aaggacttgagtcagctggtgggcgagcatgtgaccatcatcgacaccatgaacggcaag
aagcgcgacgtggcgggagtgacggccgagttcggcgtgccgccggcgctgatgatcgac
taccaggccctggtgggcgacaccgtggacaacgtgcccggcgtgaccaaggtcggaccc
aagaccgccgccaagtggctggaggagcatggttcgctggacaatctgatcgcccgcgcc
gcagatatcaagggcgttgccggtcagaacctgcgcgatgcgattgccagcggccagctg
gcgctgagccgccagttggtgaccatgaagaccgattgcgatctgtcctcctatatcagc
ggcctgccgcagctcgatgccatcacgctggccgagcccgatagcgcagcgcttgcgccc
ttctacgagaaatacggcttcaaggggctggtgcgcacgctgggcgccgcagcagccgaa
gccaaggcggccaagacggacagtgcccagggcggcctgttcgatgccgatgacgcggcg
gcgaccgaggtcgccgtgactgcccagcagcgcgatgtgctctacaccaccattctgaac
gaggctcagctcgatgaatggctggccaagatcagcgccgccgagctgacggcgctggat
acagagaccgattcgcttgacgagatggtggcccgcatcgtcggcatctccttcagcgtg
gccgtgggcgaggccgcctatattccgctgcgccacgaaggcatggacgtgcccgagcag
ctcaatatggacatggtgctggccaggctcaagccctggctggaagatgccggcaagaag
aagctgggccagcatgtcaaatacgaccagcatgtgtttgccaaccacggcatcaccgtg
cgcggctatgcgcacgacaccatgctgcagtcctatgtgctcgaagccgaccgcccgcac
aatctgaccagcctggcgctgcgccatgtgagtcgcagcggcatcagctacgaggacctg
tgcggcaagggcaagaaccagattccgtttgcccaggtgagcgtggacaaggccgcggcg
tacagctgcgaggactccgaccagaccctggatgtgcacaacaccttgtggccgcgcatc
caggcccatgccggtctgctgcatatctacgagctggaaatgcagaccagcgaagcgctg
tttcgcatcgagcgcaatggcgtgagcatcgacgctggcgagctggcacgccagagcaac
gatctgggcgcgcgcatcctcaagctcgaggaagaggcttacgagattgcgggccagccc
ttcaatctgtcctcccccaagcagctgggcgagatcttcttcgacaagctgggcatgccc
gtcgtgaagaagaccgccaccggcgcgcgcagcacggacgaggaagtgctggaaaagctg
gccgaggactatccgctgcccgccaagctgctcgaacaccgttcgctgtccaagctcaag
ggcacctacaccgacaagctggcgcagatggccttgcccagcgacggccgcgtgcacacc
cactatgcccaggccgtggcggtgacggggcgcctgtccagcaacgaccccaatctgcag
aacattccggtgcgcacgcccgaaggccgccgcgtgcgcgaagcctttgtggcacccgag
ggcaagctgattgccagcgccgattattcacagatcgagctgcgcatcatggcccatctg
tcgggcgacgaggccctgttgagcgccttcaagaacggcctggacgtgcaccgtgcgacg
gcggccgaagtcttcggcgtgagtgtggacgaggtcagcagcgagcagcgccgctatgcc
aaggtgatcaacttcggcctgatctacggcatgagcagcttcggcctggccaagaacctg
ggcattgaaaccaaggcagcggctgcctatatcgacaagtacttccagcgctatcccggc
gtgaagcgctatatggaccagaccgtggagctggcccacgcccagggctatgtggagacc
gtgttcggtcgccgcctggtgctgcccgagatcaatggcggcaacggcccgcgcaagaaa
gcggccgagcgcgccgccatcaacgcccccatgcagggcacggcggccgatctgatcaag
aaggccatggtggccgtgcaggccaggttggatgccgaaaagcccgaggtgctggtcatc
atgcaggttcacgacgaactggtgttcgagctgcccgaagccgccagggactgggtgcag
gccgagatcccttccatcatggccggcgtggccgacctgtccgtgccgctgctggccgag
atcggctttggcagcagctgggaaaaggcgcattga

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