Comamonas thiooxydans: CtCNB1_1425
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Entry
CtCNB1_1425 CDS
T01109
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctt03032
]
CtCNB1_1425
03036 Chromosome and associated proteins [BR:
ctt03036
]
CtCNB1_1425
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_1425
DNA replication proteins [BR:
ctt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CtCNB1_1425
Chromosome and associated proteins [BR:
ctt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CtCNB1_1425
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CtCNB1_1425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ACY32171
UniProt:
A0A096EUY8
LinkDB
All DBs
Position
complement(1614701..1615021)
Genome browser
AA seq
106 aa
AA seq
DB search
MTRSDLVEELAAQFGQLNQRDAEQAVKTILDAVSDALVRGHRIEIRGFGSFAINHRQPRI
GRNPRSGESVQVPSKRVPHFKPGKALREAVDNLKAEDSAAQQPQIA
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatccgatctcgtcgaagaacttgccgcccaatttggccaactcaaccaacgt
gatgccgagcaggccgtcaaaaccattctggatgccgtcagcgatgccctggtgcgcggt
caccgtattgaaattcgcggctttggcagctttgccatcaatcaccgccagccccgcata
ggccgcaacccccgctccggcgaatccgttcaggttccttccaagcgcgtgcctcatttc
aagccaggcaaggccctgcgcgaagccgtggacaatctcaaggccgaagactccgctgcc
cagcagccgcagatcgcctga
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integrated database retrieval system
