Comamonas thiooxydans: CtCNB1_1611
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Entry
CtCNB1_1611 CDS
T01109
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt03030
DNA replication
ctt03430
Mismatch repair
ctt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CtCNB1_1611
03430 Mismatch repair
CtCNB1_1611
03440 Homologous recombination
CtCNB1_1611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctt03032
]
CtCNB1_1611
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_1611
Enzymes [BR:
ctt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CtCNB1_1611
DNA replication proteins [BR:
ctt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CtCNB1_1611
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CtCNB1_1611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
EPF
Motif
Other DBs
NCBI-ProteinID:
ACY32357
LinkDB
All DBs
Position
1827232..1828257
Genome browser
AA seq
341 aa
AA seq
DB search
MSASDLEAPWIAAQRGRLLAQRGHAWLLQGPSGLGQYALGLSLVRAWLCEQPSAQGACGH
CASCHAIEVRAHADLCVLMPEVQMMELGWPLPEKAQADIDDKKRKPSKEIRVEAMRDAVE
FCQRTSARGRGKAVLVYPAEQMNAITANALLKTLEEPPGDTRFVLASEAAHQLLPTIRSR
CLTHTMTWPAAAEAAQWLQAQGLNEPDAAAALQAAGGRPGDALRMAADAGKAAAWAQLPR
QLAKGDVAALAAFAPVDAVQALQKICHDLMALAGGGEPRYFSPADLPGKPLPMALLAEWS
RELVQAARTADHPFNAGLMMEALASRARAVLISGKAARAVR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatccgatctcgaagcgccctggatcgccgcacagcgtggccgcctgctggcc
cagcgtggtcatgcctggctgctgcaagggccttcgggtctgggccagtacgcactgggc
ctgtcgctggtgcgcgcctggctctgcgagcagccgtctgcgcaaggcgcttgtggccac
tgcgccagctgccatgccatcgaggtgcgtgcccatgccgatttgtgcgtgctcatgccc
gaggtgcagatgatggagctgggctggccgctgccggaaaaagcccaggccgacatcgac
gacaaaaagcgcaagcccagcaaggaaatccgcgtggaagccatgcgcgatgccgtggag
ttctgccagcgcaccagcgcgcgcggacgcggcaaggccgtgctggtctacccggccgag
caaatgaatgcgattaccgccaacgccttgctcaagacgctggaggagccacccggagac
acccgcttcgtgctggccagcgaggcagcgcaccaactgctgcccaccattcgcagccgc
tgcctgacgcacaccatgacctggcctgcggcggccgaggccgcgcagtggctgcaggcg
cagggtttgaacgagccggatgccgcagcggccttgcaggctgccggcggccgacccggc
gatgcgctgcgcatggcggcggacgcgggcaaggccgccgcctgggcgcaactgccaagg
cagctggccaagggagatgtggctgcgctggcggcttttgctcccgtggatgccgtgcag
gcgctgcagaaaatctgccacgacctgatggctctggccggcggcggcgagccccggtat
ttctcgcctgccgatctgccgggcaagccgctgcccatggcgctgctggccgaatggtcg
cgcgagctggtgcaggcggcgcgcacggccgatcaccccttcaatgccgggttgatgatg
gaggccctggcttccagggcgcgggcggtgctgatctcgggcaaagccgccagagccgtg
cgctag
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