Comamonas thiooxydans: CtCNB1_1643
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Entry
CtCNB1_1643 CDS
T01109
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ctt
Comamonas thiooxydans
Pathway
ctt02020
Two-component system
ctt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CtCNB1_1643
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CtCNB1_1643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctt03000
]
CtCNB1_1643
Transcription factors [BR:
ctt03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CtCNB1_1643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
HTH_24
Rrf2
HTH_IclR
MarR
HVO_A0261_N
wHTH-PRTase_assc
HTH_36
HTH_23
HTH_46
HTH_28
Sigma70_r4
HTH_29
GntR
Crp
TrmB
HTH_11
HTH_AsnC-type
HTH_3
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
ACY32389
LinkDB
All DBs
Position
complement(1858468..1859229)
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AA seq
253 aa
AA seq
DB search
MPTARKRGSFEHVNSNDLWAIVQAGRWFRSLPPELTAQMQQLAQPRLLTAGEWLFRRGDA
PCGLYAVARGSLSISGTAALQENTRTALLTLIEPPSWLGEIALFDGEPRTHDACANTACA
LLHIPIPPLREWLDANPHCWRHMALLLTHKLRASLIALEEQTVLPAPQRVMCRLVQMAMG
HEQWADRMRTHRELAVSQEQIARMLGLSRQTTNQILQELQQAGWLQLRRGKLEVLDLAAL
KAAALTGQIPTSS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgcccactgcacgcaagcgcggcagcttcgagcatgtcaactccaatgacctctgggcc
atcgtgcaggccggccgctggttccgctcgctgccgccggaattgaccgcccagatgcag
cagctggcccagccaaggctgctgaccgccggcgaatggctgtttcgccgcggcgatgcc
ccctgcggcctgtatgcggtggccaggggctcgctcagcatctccggcacggcagcgctt
caggaaaacacccgcacggccttgctgaccttgatcgagccgccgagctggctgggcgag
atcgccctcttcgatggcgagccccgcacccacgacgcctgcgccaacaccgcctgcgcc
ctgctgcatatccctataccgccgctgcgcgaatggctggatgccaacccgcattgctgg
cgccacatggccctgctgctgacccacaagctgcgtgccagcctgatcgcgctggaggag
cagaccgtgctgcctgcaccgcagcgcgtgatgtgccgtctggtgcaaatggccatgggc
cacgagcaatgggccgaccgcatgcgcactcaccgcgagctggccgtctcgcaggagcag
atcgcacgcatgctcggcctgtcacgccagaccaccaaccagatcctgcaggagttgcag
caggccggctggctgcaactgcggcgcggcaagctggaagttctggacctagctgcactc
aaggccgcagcactcaccgggcaaatccccacgagcagctag
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