Comamonas thiooxydans: CtCNB1_1798
Help
Entry
CtCNB1_1798 CDS
T01109
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctt03016
]
CtCNB1_1798
Enzymes [BR:
ctt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CtCNB1_1798
Transfer RNA biogenesis [BR:
ctt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CtCNB1_1798
Prokaryotic type
CtCNB1_1798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACY32544
LinkDB
All DBs
Position
2038019..2039011
Genome browser
AA seq
330 aa
AA seq
DB search
MNAPRTRVQRRPVHGVLLLDKPLGWSSNDILQKVKWLLRAEKAGHTGTLDPLASGVLPLC
FGAATKFSQLQLEAEKTYEAIARLGQTTTTADAEGDVVLERVADLAAITPERLAQVQAQF
TGDIKQVPPMHSALKKDGKALYEYARAGVEVERPARDVTIHALELTLVQDDQGHPAVKMR
VSCSKGTYIRTLGEDVGEALGCGAHLRFLRRVETGGLEVSRCVTLEALEAMNDEERIAQV
QPVDTLLHRHAVVTLGEQDAGRFLSGLRRRGSWADAPAVAVYGERPHALLGVGRVASGEL
IPERLLSPLEIQQILEGTPRPQASGILETL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctcgcacccgggtgcagcggcgccctgtgcatggggtgttgctgctcgat
aaaccgctgggctggtccagcaacgatatcttgcagaaggtcaagtggctgctgcgcgcc
gaaaaggccggacatacaggcacgcttgatccgctggccagtggcgtgctgccgctgtgt
ttcggcgctgccaccaaattcagtcagcttcagctcgaagccgagaaaacctacgaagcc
attgcccgcctgggtcagaccacgaccacggccgatgccgagggcgatgtggtgctggag
cgtgtcgcggatctggccgccatcacgcccgagcgcctggcgcaggtgcaggcccagttc
acgggcgacatcaagcaggtgccgcccatgcacagtgcgctgaagaaggacggcaaggca
ctctatgaatatgcccgtgcgggcgtggaagtggagcgccccgcacgagatgtcaccatt
catgcattggagctgactctggtgcaggacgatcaggggcatccggccgtcaagatgaga
gtgagctgcagcaagggcacttacatccgcacattgggcgaagacgtgggcgaggccttg
ggctgtggcgcccacttgcgttttctgcgccgtgtggaaaccggcggtcttgaggtgtcg
cgctgcgtgacgctggaggcgctggaagccatgaacgatgaagagcgcatcgcgcaggtc
cagcctgtggataccctgctgcatcgtcatgccgtcgtcaccttgggtgaacaggatgca
ggtcgctttctatcaggcttgcgccgtcgagggtcttgggcggatgccccggccgtggcg
gtgtatggtgagcgcccgcatgcccttttaggggtaggccgtgtggcgagcggggagttg
atccccgagcgcctgctcagtccgctagaaattcaacaaattttggaaggaacgccgcgt
ccacaagcaagcggcattttggaaacattatga
DBGET
integrated database retrieval system
