Comamonas thiooxydans: CtCNB1_1955
Help
Entry
CtCNB1_1955 CDS
T01109
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ctt
Comamonas thiooxydans
Pathway
ctt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CtCNB1_1955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctt03021
]
CtCNB1_1955
Transcription machinery [BR:
ctt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CtCNB1_1955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
HTH_11
HTH_23
TnsD
HTH_7
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ACY32701
LinkDB
All DBs
Position
2213345..2213785
Genome browser
AA seq
146 aa
AA seq
DB search
MQGWLRRKVGNAFDAADLTQDTFVRILGVREPPRLESPRAYLTTVAKGVLVNWCRRQALE
RAYLEALALLPEPEAPSPEHRALVLEALHEIDAMLDALPPLVRRTFLLSQLEDMKYDDIA
SQLGVSLTSVKRYMALAFRQCLALME
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
ttgcagggctggttgcgccgaaaggtcggcaatgcctttgacgcagcagatctgactcaa
gacacttttgtccgtatcctgggcgtgcgtgagccgccgcgtctagagtcgccgcgtgct
tatctgaccaccgtggccaaaggggtgcttgtcaactggtgccggcggcaggcgctggag
cgtgcctatctggaggctctggccctgttgccggaacctgaagcaccgtcgccggagcac
cgggccctggtgctggaggccctgcatgagatagatgccatgcttgatgccttgccgccg
ctggtacggcgcacttttctgctttcgcagctcgaggacatgaagtacgacgatatcgcc
tcgcagctgggcgtatcgctgaccagcgtcaagcgctacatggccctggctttcaggcag
tgtctggcgttgatggaatga
DBGET
integrated database retrieval system
