Comamonas thiooxydans: CtCNB1_1993
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Entry
CtCNB1_1993 CDS
T01109
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_1993
Enzymes [BR:
ctt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CtCNB1_1993
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CtCNB1_1993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ACY32739
LinkDB
All DBs
Position
2259741..2261300
Genome browser
AA seq
519 aa
AA seq
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MSDSTAATHSAHTLRLVLGDQLNPEHSWFRKVDLQVVYVLMEVRQETDYVLHHAQKILAI
FAAMRDFARQLRSDGHRVRYVSIDDASNRQSIPGNLAALAVHYGAHTVQWQQPDEWRLDA
QLQAWASSQQLTCTAVDSEHFLTARDDLATQMRGRRQWLMEHFYRTMRRRYRLLLDEHER
PFGGQWNFDSDNRKPWPGTPAEPEDWRPLHDHSTLWEIVQRSNVQSFGDAQADALRWPLN
RQEAMRCLEAFVTHALPHFGDYEDAMSSQAPRLFHSLLSFALNVKMLHPLEVLQCAEAAW
RSGHAPLAAVEGFVRQILGWREYIRGIYWAHMPGYESRNALEHHLPLPHWFWTGETHMRC
LQQSIKQSLQTAHAHHIQRLMVIGNFALLAGLNPMELHRWYLGIYIDAFEWVELPNTLGM
SQRADGGLIATKPYVSSAAYLQRMGDYCQGCAYNPKQKTGPSACPFNALYWDFFARHIDV
LGSNHRLALVYRQWQKFPPEQQSALRAHAQQLREQLDHL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagtacggccgccacccacagcgcacataccctgcgtctggtactgggtgat
cagctcaatccggaacacagttggtttcggaaggttgatctgcaggtcgtgtatgtactg
atggaggtgcggcaggaaaccgactatgtgctgcaccatgcacagaaaattctggccatt
tttgctgccatgcgcgactttgcgcgccagctgcgttccgacggtcaccgggttcgttat
gtgtcgatcgacgatgccagtaatcgccagtccatacccggcaacctggctgcgcttgct
gtgcactacggcgcccacacggtgcaatggcagcagcccgacgagtggcggctggacgct
caactacaggcttgggctagcagccagcagttgacctgcactgcagtagacagcgaacac
ttcctaacggcacgcgatgacctggctacccagatgcgtgggcgccgccaatggttgatg
gagcatttctaccgcaccatgcgccgccgttaccgactcctgctggacgaacatgaacgg
ccctttggcggacagtggaactttgacagcgacaaccgcaaaccctggccaggaacccct
gctgagcctgaggactggcgtcccctccacgaccacagcactctctgggaaatcgtgcag
cgcagcaatgttcaaagcttcggtgacgcgcaggcggatgcactgcgttggccattgaac
cggcaagaggcaatgcgctgtttagaggcatttgtcacccatgcactgccgcactttggc
gactatgaagacgccatgtcaagccaagcgccgcgcttattccactctttgctttcgttc
gcgttgaacgtgaagatgctgcaccctctggaggtgctgcaatgtgccgaagccgcctgg
cgctcagggcacgcgccgctcgctgctgtggaaggctttgtgcgccagatcctcggctgg
cgtgagtacatccgcggcatctattgggcacatatgccgggctacgaaagtcgcaatgcg
ctggagcaccacttgccgcttccgcactggttctggaccggggaaacccatatgcgctgt
ttgcagcagtccatcaagcagtcgctgcaaaccgcacatgcccaccatatccaacggctg
atggtgatcggtaactttgccttgctggcggggctgaatcccatggagctgcaccgctgg
tatctgggcatctacattgacgcttttgagtgggtagagctgcccaacacgctgggtatg
agccagcgcgccgatggcggcctgattgccaccaaaccctatgtcagcagcgcggcctat
ctgcagcgcatgggcgactattgccagggttgcgcctacaaccccaagcagaagaccggc
ccgagcgcctgccctttcaacgctctttactgggacttttttgcgcgtcacatcgatgtt
cttggcagcaaccaccgattggcactggtgtaccgacagtggcagaaattcccgcctgag
cagcaatcagcgttgcgcgcacatgctcagcaactgcgcgaacagctcgaccacctgtag
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