Comamonas thiooxydans: CtCNB1_3417
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Entry
CtCNB1_3417 CDS
T01109
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctt03000
]
CtCNB1_3417
Transcription factors [BR:
ctt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CtCNB1_3417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
PBP_like_2
HTH_28
HTH_30
PBP_like
P22_Cro
MarR_2
HTH_IclR
YdaS_toxin
HTH_20
HTH_Tnp_ISL3
DUF2089
MarR
HTH_5
HTH_29
HTH_11
HTH_50
HTH_24
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
ACY34163
UniProt:
A0A7M1KXE0
LinkDB
All DBs
Position
3865028..3865960
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AA seq
310 aa
AA seq
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MSTARYRAFIAVAQQGSLSAAARALGVSQPTVSSQIATLERQSQIELFHRQGYRMTLTGA
GHKLMTLAQKLLALEAETEFFLRDSGQLNQGELKIGAVGPFHVIEMVAAYSARHPGMKLS
IRMGNSQQVLHDLENYTTDVAVLAGLYDRPELLVREYARHAIILFAHIDHPLARREQVEL
GELHGLPLLLREQGSTTRTAIEKALQAAGVKPRTQLEIGSREAIREAVARGLGIGAVSEA
EFIADPRFRPVRIAGDPASTTTYVYCMKERSESLLVRSFLKAIEGSAAPNLPVLLTAPKP
LIAPTAKKLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcccgctatcgagcctttatcgccgtggcccagcaaggcagcctgagcgcg
gcggcccgcgccctgggcgtcagccagcccacggtctccagccagatagccacgctggag
cggcaaagccagatcgagctcttccatcgccagggctatcgcatgacgctcaccggcgcc
ggccacaagctcatgacgctggcacagaagctgctggcactggaggctgaaacagaattc
tttctgcgcgactcgggccagctcaaccagggcgagctcaagatcggcgccgtggggccg
tttcatgtgatcgagatggtggcggcctacagcgcccgccatcccggcatgaagctgtcg
attcgcatgggcaactcgcagcaggtgctgcacgatctggagaactacaccaccgatgtg
gcggtgctagccggcctgtatgacaggcccgagctgctggtgcgcgaatacgcgcgtcac
gccatcatcctgtttgcccatatcgaccatccgctggcaaggcgcgagcaggtcgagttg
ggcgagctgcacggcctgccgctcttgcttcgtgagcaaggctcgaccacgcgcaccgct
atcgagaaagcgctgcaggcagccggcgtgaagccccgcacccagctggagatcggcagc
cgcgaagccatacgcgaggccgtggcgcgcggcctgggcatcggcgccgtgtccgaagcc
gaattcatcgccgacccgcgcttcaggcccgtgcgcattgccggcgacccggccagcacc
accacctatgtctattgcatgaaggagcgcagcgaaagtctgctggtgcgctccttcctc
aaggccattgaaggcagcgcggctcccaatctgcctgtactactgaccgctccaaaaccc
ttgatcgctccaacggccaagaagctggcgtaa
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