Comamonas thiooxydans: CtCNB1_3423
Help
Entry
CtCNB1_3423 CDS
T01109
Name
(GenBank) D-ribose-binding periplasmic protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctt03000
]
CtCNB1_3423
Transcription factors [BR:
ctt03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CtCNB1_3423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_23
HTH_AraC
DUF7317
HTH_10
AbiEi_4
HTH_IclR
TetR_N
HTH_24
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ACY34169
LinkDB
All DBs
Position
complement(3871213..3872286)
Genome browser
AA seq
357 aa
AA seq
DB search
MPPETRTKSETPADSASSRRSRASGRVTLSDVAQAAGVSPMTVSRALRGERRVAAALVDK
VREVADSLGYVPDLAARALASQKSTQVLVLVPMLSNTLFVEVLEAVHKVLFAQGYHMLIG
VTHYDPAEEEQLLRAYLPMRPAGLLLTGFDHSEESRKLLAANPVPRVHLMELREPGTGPD
CYSVGFSQIAAGAEMTRHLLDKGYRRIAFCGAQLDARVMQRLEGYRQVLKQAGLYDRSLE
ILNPERSSLALGARQFETLLKARTTVDAIFFCNDDIAQGALLEANRMGVKVPEQVAIAGF
NDLPGSDQMVPPLTTIHTPRDEVGRKAASMLLQLLAGDTVREASVDLGFRLVPRAST
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttgcctcccgagacccgtaccaagagtgaaaccccggccgacagcgcttcttcaaggcga
tctcgtgccagcgggcgtgtcaccctcagcgatgtggcacaggctgcgggcgtgagtccg
atgacggtctccagagccttgcgcggagagcgtagagtggctgctgccctggtcgacaaa
gtgcgcgaggttgcggattctctgggttatgtgcccgatctggcagcgcgtgcactggcc
tcgcaaaaaagcacccaggtgctggtactggtacccatgctctccaacaccttgtttgtg
gaggtcctggaggctgtgcacaaggtgctgtttgcccagggctatcacatgctgatcggc
gtgacccactacgaccctgcggaggaagagcagttgctgcgggcctatctgcccatgcga
cctgccgggctgttgctgaccgggtttgatcacagcgaagagtcgcggaaattattggct
gccaatcccgtgccgcgcgtgcatctcatggagttgcgcgagcccggcacgggccccgat
tgctacagcgtaggtttttctcagattgcagctggcgctgaaatgacccgtcatctgctg
gacaagggatacagacgcatcgcattttgcggagcccagctcgacgcgcgtgttatgcag
cgcctggaaggttatcggcaggtgctcaaacaggccggcctgtatgaccggagcctggag
attctcaatcccgagcgttcatcgctggcgctgggtgcaaggcagtttgagacacttctc
aaggcgcggactacggtggatgccatctttttctgcaatgacgacattgcacaaggcgca
ttgctggaggccaatcgcatgggggtcaaggtgccggagcaggtggcgatcgccgggttc
aacgatctgcctggcagtgatcagatggtgccgcctctgaccaccatccatacacccagg
gatgaagtgggcagaaaagctgccagcatgctgctgcagttgctggcaggggacaccgtc
agagaggccagcgtggatctgggcttcaggctggtgcccagggccagcacctga
DBGET
integrated database retrieval system
