Comamonas thiooxydans: CtCNB1_3883
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Entry
CtCNB1_3883 CDS
T01109
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt00300
Lysine biosynthesis
ctt00470
D-Amino acid metabolism
ctt01100
Metabolic pathways
ctt01110
Biosynthesis of secondary metabolites
ctt01120
Microbial metabolism in diverse environments
ctt01230
Biosynthesis of amino acids
Module
ctt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
ctt_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CtCNB1_3883
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CtCNB1_3883
Enzymes [BR:
ctt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CtCNB1_3883
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ACY34629
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All DBs
Position
4359286..4360533
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AA seq
415 aa
AA seq
DB search
MANPFSPAQLWNLADQYGTPLWVYDAATIRERIAQLKAFDTVRFAQKACSNIHILKLMRE
QGVKVDAVSRGEVLRALAAGFTPGFGEPADIVFTADVMDEATLATVVEHQVPVNAGSIDM
LHQLAAVSKGHHVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELEVALDAIKAGGLVLA
GLHMHIGSGVDYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYKQGDATIDTNH
YHGLWDAARKQAEGIVGHSLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFN
ELMRPSMYGSYHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRSLAGASV
GDLLVIHDTGAYGSSMSSNYNTRPLAAEVLVDGAQSQLIRRRQTVEELLALELGL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccccttctctcccgcacagctctggaacctggctgaccagtacggcacgccg
ctgtgggtttatgacgccgctaccatccgcgagcgcattgcccagctcaaggctttcgac
accgtgcgctttgcccagaaggcctgctccaacattcacatcctcaagctcatgcgcgag
caaggcgtgaaggtggatgcggtctcgcgcggcgaagtcctgcgtgcgctggcggcgggc
ttcacgcccggcttcggcgaacctgccgatatcgtcttcacggccgacgtgatggacgag
gccacgctggccaccgtggtggaacaccaggtgcctgtgaacgcgggctccatcgacatg
ctgcaccagctggccgccgtgtccaagggccaccatgtctggctgcgcatcaaccccggc
ttcggccacggtcacagcaacaagaccaacaccggcggcgagcacagcaagcacggcatc
tggcacagcgaactcgaagtcgcactggacgccatcaaggccggcggcctggtgctggcc
ggcctgcatatgcacatcggctcgggcgtggactacggccatctgcaggaagtctgcggc
gccatggtcaagctggtcgagcgcaccaaggcggcgggcgtggacctgcatgcgatttcg
gccggcggcggcctgtccatcccctacaaacagggcgatgccaccatcgacaccaaccac
taccacggtctgtgggatgcggcgcgcaagcaggcagaaggcatcgtgggccacagcctg
ggtctggaactggaacccggccgcttcctggtggccgagtccggcgtgctgctgggcacc
gtgcgcgccaccaagaatgcgggcagcaaccacttcgtgctggtggacaccggcttcaac
gagctgatgcgccccagcatgtacggcagctaccacggcatggaagtgctgcgccgcgac
ggccagagcctgcccgcgcaggacagcgtggtggccggcccgctgtgcgaatcgggcgat
gtcttcacccagggcgacggcggcgtggtgctgccgcgctcgctggccggcgccagcgtg
ggcgacctgctggtgattcatgacacgggcgcctacggcagctccatgtccagcaactac
aacacccgcccgctggccgccgaagtgctggtcgatggcgctcagagccagctgattcgc
cgtcgccagacggtggaggaactgctggccctggaattgggcctgtaa
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