Comamonas thiooxydans: CtCNB1_3922
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Entry
CtCNB1_3922 CDS
T01109
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctt03021
]
CtCNB1_3922
Transcription machinery [BR:
ctt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CtCNB1_3922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
IF2_N
DUF2390
Motif
Other DBs
NCBI-ProteinID:
ACY34668
LinkDB
All DBs
Position
4397236..4398210
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AA seq
324 aa
AA seq
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MKIMEERKPAMKTASGSIATALAPANPWALVPPLGNLDAYISAVNRMPMLTLEEEQDYAR
KLKEHNDLDAAGRLVMSHLRLVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGV
RLVSYAMHWIKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKHDLKSDAAMADEELAL
RETLTSNEIDAVAAKLNVKREEVIEMETRLAGGDVLLDPSPSDDGEQAFGPIAYLADASH
EPTAMLESRQRDHLATDGLVMALEGLDDRSRRIVEERWLKVNDDGSGGMTLHELAAEYGV
SAERIRQIEVAAMKKMKKALAEFA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatggaagaaaggaaacctgcaatgaaaactgcctccggctccattgctact
gccttggcgcccgcgaacccctgggcgctggtacctccgctgggcaacctggatgcctat
atctcggcggtcaatcgtatgccaatgctcacccttgaggaagagcaggactacgctcgc
aagctcaaagaacacaatgatctggacgccgccgggcgtctggtgatgtcccacctgcgt
ctggtcgtctccatctcgcgccagtacctgggctatggtctgcctcacggcgacctgatt
caggaaggcaatgtgggcctgatgaaggctgtcaaacgattcgaccccgatcagggcgtg
cgtctggtcagctacgccatgcactggatcaaggcggaaatccacgagtacattctgaag
aactggcgcatggtcaaggtcgccacgaccaaggcccaacgcaagctgttcttcaatctg
cgctcgatgaagcatgacctgaagtccgatgctgccatggcggacgaagagctggccctg
cgcgagacgctgacctcgaacgaaattgacgcggttgctgccaagctcaacgtcaagcgc
gaggaagtcatcgagatggaaacccgtctggccggtggcgatgtgctgctggatccttct
cccagcgacgacggagagcaggccttcggccccatcgcctacctggctgatgccagccac
gagcctaccgccatgcttgaatcgcgtcagcgcgatcatctggcgaccgatggtctggtc
atggccctggagggactggatgaccgcagccgccgcatcgttgaagagcgctggctcaag
gtcaatgacgacggctctggcggcatgacgctgcatgagctggctgccgaatacggtgtg
agcgccgagcgcattcgccaaattgaggtagccgccatgaaaaagatgaaaaaagcgctg
gccgagtttgcgtaa
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