Comamonas thiooxydans: CtCNB1_3984
Help
Entry
CtCNB1_3984 CDS
T01109
Name
(GenBank) DNA photolyase, FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_3984
Enzymes [BR:
ctt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CtCNB1_3984
DNA repair and recombination proteins [BR:
ctt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CtCNB1_3984
Prokaryotic type
CtCNB1_3984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACY34730
LinkDB
All DBs
Position
4462849..4464387
Genome browser
AA seq
512 aa
AA seq
DB search
MIGADSADMQRFYWRSMTPSYPVGLIWLRRDLRLADNAALYHALQQCEKLYCVFVFDDSI
LAALPRADRRVEFICQSLTELAAALRETAGRPQTGLITRRGLPQDIIPALARQLGAGAVF
CNDDDEPAAIARDAQVARSLKSQGQLLLRFKDHRIFARDEVLTQSLSPFSVFTPYKNAWL
RKITPFYLSAYPSERDLASKLADLPDTERRPIPSAADLGFAPDTLAGLRLPTGVSGARQL
LADFLPRLPQYKTARDFPALKGPSYLSVHLRFGTVSIRELARLAHEAAHNEDWSAAAREG
AATWLSELIWRDFYFQILAHQPYVVERSFKPAYDAIEWETGAEADTLFAAWCEGRTGYPL
VDAAMRQLNSSGYMHNRLRMVTASFLVKDLGLDWRRGEAYFAEKLNDFDLAANNGGWQWA
ASTGCDAQPWFRIFNPVTQSEKFDPDGKFIVRYVPELTPLPAKLRHAPWLAKPLELAEAG
ITLGRDYPLPVVDHAAAREKTLARYGILKKEA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
ttgataggcgcagattctgcagacatgcagcgattttactggcgatccatgactccttct
taccctgtgggcttgatctggctgcggcgcgacctgcgtctggccgataacgcagccctt
tatcatgcattgcagcaatgtgaaaagctgtattgcgtctttgtcttcgacgacagcatt
cttgccgccctgccccgcgccgaccgccgcgtggagttcatctgccagagtctgaccgag
ctggctgccgccctgcgcgagaccgcaggacgcccgcagacagggctgatcacgcggcgc
ggcctgccccaggacatcatcccggccctggcccggcagctgggcgcgggcgccgtcttc
tgcaacgacgacgacgagccggcggccatcgcccgcgacgcccaggtggcgcgcagcctc
aagagccaggggcagttgctgctgcgcttcaaggaccaccgcatctttgcgcgcgacgag
gtgctgacccagagcctgtcgccattttcggtcttcacgccctacaagaacgcctggctg
cgaaagatcacaccgttctatctctcggcctaccccagcgagcgcgatctggcgagcaag
ctggccgatctgccggacaccgagcgccgcccgatcccctcggctgcggatctgggcttt
gccccggacacgctggccggcctgcgcctgcccaccggcgtcagcggcgcgcgccagctg
ctggccgattttctgccgcgcctgcctcagtacaagacggcacgcgactttccggccctc
aaggggcccagctatctcagcgtgcatctgcgcttcggcaccgtgtcgatacgcgagctg
gcccgcctcgcccatgaggcggcccacaacgaggactggtctgccgcggcacgcgaaggg
gcggccacctggctcagcgagctgatctggcgcgacttctacttccagatcctggcccac
cagccttatgtggtggaacgcagcttcaagccggcgtatgacgccatcgaatgggagacg
ggagccgaggccgacaccctctttgccgcctggtgcgaaggccgcaccggctacccgctg
gtcgatgccgccatgcgccagctcaattccagcggctatatgcacaaccggctgcgcatg
gtcacggccagctttctggtcaaggacctgggtctggactggcgccggggcgaagcctat
ttcgccgaaaagctcaatgacttcgatctggcggccaataacggcggctggcaatgggcg
gcctccacgggctgcgatgcccagccctggttccgcatcttcaacccggtgacccagagc
gagaagttcgatccggacggcaagttcatcgtgcgctacgtccccgagctgacgcccttg
ccggccaagctgcggcatgccccctggctggccaagccgctggaactggccgaagcaggc
atcacactggggcgcgactatcccttgcccgtcgtggatcatgcggcagcgcgggagaaa
accctggcgcgctacggaatcctcaagaaagaagcttga
DBGET
integrated database retrieval system
