Comamonas thiooxydans: CtCNB1_4049
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Entry
CtCNB1_4049 CDS
T01109
Name
(GenBank) hypothetical conserved protein
Organism
ctt
Comamonas thiooxydans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DUF8742
NOV_C
SNF2-rel_dom
ResIII
DEAD
SLFN-g3_helicase
ERCC3_RAD25_C
AAA_22
Cas3-like_C_2
NAT10_TcmA_helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACY34795
LinkDB
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Position
complement(4545755..4549288)
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AA seq
1177 aa
AA seq
DB search
MKLEEIAKGALISGIEPGKVARVVSADPLGENAVTVVYRADDGRLDERVLFRSNEADLSI
ATAGRPWSFDADGEGFKLAAEAIRINLAHLFDPMMAVHTSNVEPLPHQITAVYESMLPKQ
PLRFVLADDPGAGKTIMAGLLIRELLMRADAARVLIVSPGSLVEQWQDELYEKFGLSFTL
FTRELVDQSRTGNPFEDHDLLVARLDQLSRSEELQEKIKLSRFDLIVVDEAHKLSATWFG
TKINETKRFKLGQLLGSVARHFLLMTATPHNGKEEDFQLFLSLLDSDRFYGRFRDGAHKV
DVSDLMRRMVKEDLLKFDGTRLFPERVAYTANYKLSDAERALYDAVTAYVKEEMNRADAL
DGKRKGTVGFALTALQRRLASSPEAIYQSLRRRRDKLKRRIDEERQRQRGGRISASETFA
EQASEDIWDSEDDLAAEDYEQFEEEVVDQATAAQTIAELEAEVFTLEHLEKQARALVVSG
QDRKWEELREILQNTPEMLGPDGLQRKLIIFTEHRDTLNYLADRIRGLLGKREAVTMIHG
STHREDRRKVQEMFRTDRDTRVLLATDAAGEGVNLQNANLMVNYDLPWNPNRLEQRFGRI
HRIGQTQACHLWNMVAAETREGNVFQKLFEKLEIERKALGGRVFDILGEVFDGVSLRELL
IEAIRYGEDPARKRHLQEVVQGALDTEKLREIISRNALANEVMDERRLFALKEEMEKAEA
RKLQPYFIRSFFAQAFAQLGGDLKPRGSGRFEITHVPALVRERDRQLQGRERRSMTPVMV
KYERVCFEKGNIRVEDRPTEQQASLIHPAHPLMQSVVDLAIEQHRAKLKQGAVLLAPNDE
GVEPKLLLMLDHSVKEGGESGIVVSRRLQFVTIDKAGVVENAGWAPHLDLTALDETQLNM
VADQVQADWIKKDLEQAAMAHASERLVPEHFEEVRFRRESQIDKNLAAIRERLVKEIDYW
SDRHDKLKTDLQAGKDVRLTLENVRRMIDELSARLDTRTKELEAMRHVVSGIPVVVGGAL
IIPAGLLAQRNGEPQGQTWTANADARARVERVAMQTVRKAEEALGHEVIDVSAEKCGWDL
TAVVPAKDGKLPQARHIEVKGRAKGQTIITVTRNEILYGLNQAEKFLLAVVVVDGESPEG
PHYIRNPFTQEPDWAVTSINLDLDALLDRSSSAEDSL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgaagagatcgccaagggcgcgctcatctccggcatcgaaccgggaaaggtg
gcgcgcgtcgttagcgctgacccgttgggagagaatgccgttaccgtcgtttatcgggct
gacgacgggcgattggacgagagggtgctcttccgatccaacgaggcggatctctcgatc
gccacggccgggcggccgtggagctttgacgcggacggggagggctttaagctcgctgcc
gaggccatccgcatcaacctggctcacctgttcgatccgatgatggcggtgcatacctcg
aacgtcgagccgctgccgcaccagatcaccgccgtctacgagtcgatgctgcccaagcag
ccgctgcgctttgtgctggccgacgaccccggcgcgggcaagacgatcatggccggcctc
ttgatccgcgagctgctcatgcgcgccgacgccgcgcgcgtgctgatcgtgtctcccggc
agcttggtggagcaatggcaggacgagctctacgagaagttcggcctctccttcacgctc
ttcacccgcgagctggtggaccagagccgcacgggcaatcccttcgaggaccatgacctg
cttgtggcccggctcgaccagctctcgcgaagcgaggagctgcaagaaaagatcaagcta
agccgcttcgacctgatcgtggtcgacgaggcccacaagctctcggccacctggttcggg
accaagatcaacgagaccaagcgtttcaagctcggccagcttctgggctctgtcgctcgc
cacttcctgctaatgacggccacgccgcacaacggcaaggaggaggacttccagcttttc
ctctcgctgctcgactcggaccgcttctacggcaggttccgcgatggtgcgcacaaggtc
gatgtgtccgatctgatgcgccgcatggtcaaggaggatctgttgaagttcgacggcacg
cggctcttccccgagcgcgtcgcctacacggccaactacaagctctcggatgccgagcgc
gccctctatgacgccgtcacggcctacgtgaaggaggagatgaaccgggccgacgcattg
gatggcaagcgaaagggcacggtcggcttcgccctgaccgccttgcagcgccgcctcgcg
tctagtcccgaggcgatctaccagtcgttgaggcgccgccgtgataagttgaagcggcgc
atcgatgaggagaggcagcgccagcgcggcggccggatctcagcttccgagactttcgcc
gagcaggcttccgaagacatctgggactctgaggacgacctcgcggcggaggactacgag
cagttcgaggaagaggtggtcgaccaggccactgcggcccagactatcgccgagctcgaa
gccgaagtcttcacgctggagcatctggaaaagcaggccagggcgctggtcgtctcgggc
caggaccgcaagtgggaagagctgcgcgaaatcctgcaaaacacgccggagatgctcggc
cccgatggcttgcagcgaaagctcatcatcttcaccgagcaccgcgacacgctcaactat
ctggccgaccgcatccgcgggctgctgggcaagcgcgaggccgtgacgatgatccatggc
agcacgcatcgtgaggaccgccgcaaggtgcaggagatgttccggaccgatcgggacacc
cgcgtcctgctggccaccgacgcggccggcgaaggcgtgaacctgcaaaacgccaacctg
atggtcaattacgacctgccgtggaacccgaaccgcttggagcagcgcttcggccgcatc
caccgcattggccagacccaggcctgtcacctttggaacatggtcgcggccgagacccgc
gaaggcaacgtcttccagaagctcttcgagaagctcgaaatcgagcgcaaggccctgggc
ggccgtgtgttcgacatcctgggcgaggtcttcgatggcgtgagccttcgcgagctgctg
atcgaagccatccgctacggtgaagacccggcccgcaagcgccatctccaagaagtggtc
caaggtgcgctcgacaccgagaagcttcgcgagatcattagccgcaacgccctggccaat
gaagtcatggacgagcgccgcctcttcgccttgaaggaggagatggagaaggccgaggcc
cgaaagctccagccctatttcatccgttccttctttgcgcaggccttcgcccagctcggc
ggcgatttgaagccgcgcggctcgggccgcttcgagatcacgcacgtccctgccctcgtt
cgcgagcgcgaccgccagcttcaaggccgcgagcgccgcagcatgacacctgtgatggtc
aaatacgaaagggtctgctttgagaagggcaacatccgcgtcgaggacaggccgaccgag
cagcaagcgagcttgatccaccctgctcacccgctcatgcagtcggtggttgatctggcc
atcgagcagcaccgcgcgaagcttaaacaaggcgccgtgcttctggcccccaatgacgaa
ggcgtcgagcccaagctcctgctgatgctcgaccactccgtcaaggaaggcggcgagtcc
ggcatcgtggtgtctcgccggctccaattcgtgactatcgacaaggctggtgtcgtcgag
aacgcaggctgggcgcctcacctggatctgaccgcactcgacgagacccagttgaatatg
gtcgccgaccaagtccaggccgattggatcaagaaggacttggagcaggcggccatggcg
cacgcttccgagcggctcgtcccagagcatttcgaagaggttcgctttcgccgtgagagc
cagatcgataagaacctggcggcgatccgcgagcggctggtcaaggagatcgattactgg
tcggatcggcacgacaagttaaagacagacttgcaagctggcaaggacgtgcgcctgacc
ttggagaacgtccgccggatgatcgatgagctgtcagcccgcttggatacgcgcaccaag
gagctggaagccatgcggcatgtcgtctcgggcattcccgtcgtggtcggaggtgccttg
ataatacctgcgggcctgctggcccagcgcaatggcgagccgcagggccagacgtggacg
gcgaacgccgacgcccgcgcgcgcgtcgagcgcgtcgccatgcagaccgtccgcaaggcc
gaggaggcattgggccacgaggtcattgatgtctcggccgagaagtgcggctgggatctg
acggcagtggtgccggccaaggacggtaagctgccgcaggcgcgacacatcgaggtcaag
ggccgcgcgaagggccaaaccatcatcacagttactcgcaacgagatcctttatggcctc
aaccaggcggagaaatttttgctagcggtcgtggtcgttgacggcgaatcccccgagggg
ccgcattacatccgcaatccattcacgcaggagccggactgggcggtcacgagcatcaac
cttgacctcgatgctttgctggatcgatcgtcgtcggcggaggactcgctgtga
DBGET
integrated database retrieval system
