Comamonas thiooxydans: CtCNB1_4132
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Entry
CtCNB1_4132 CDS
T01109
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt00300
Lysine biosynthesis
ctt00470
D-Amino acid metabolism
ctt01100
Metabolic pathways
ctt01110
Biosynthesis of secondary metabolites
ctt01120
Microbial metabolism in diverse environments
ctt01230
Biosynthesis of amino acids
Module
ctt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CtCNB1_4132
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CtCNB1_4132
Enzymes [BR:
ctt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CtCNB1_4132
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACY34878
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All DBs
Position
complement(4638771..4639661)
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AA seq
296 aa
AA seq
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MCGIMQIRFTKMQGAGNDFVVLDETQARLGLSTAQYRYLANRHFGVGADQILTVRPAPAE
GVDFEYVIHNADGGEVEQCGNGARCFARYVHDKGLTDKSVIRVQTLSGVIAPEIHGNGRV
TVDMGAPQLDPAKVPFTNDGLQAETLGSTQKWPLTLDTPLQPATVWIAAVSMGNPHAVQL
VDDVDAALVGLHGPLIENHARFPQRVNAGFMQILNRSEVRLRVYERGAGETLACGTGACA
AVVAGIGWGLLDQRVDVHTRGGLLTIEWTGGAHDRVRMTGPAEFVFEGQIDIPDTL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggcatcatgcagattcgctttaccaagatgcaaggtgcgggcaacgactttgtc
gtgctcgacgaaacccaggctcgcctgggcttgagcaccgcccagtaccgctacctggcc
aatcgtcactttggcgtgggcgccgaccagatcctgacggtgcgcccggcacccgcagag
ggcgtggactttgaatatgtgatccacaacgccgacggtggcgaggtcgagcagtgcgga
aacggcgcacgctgttttgcgcgctatgtgcatgacaagggtctgaccgacaagagcgtg
atccgcgtacagaccctctcgggcgtcatcgcccccgaaattcatggcaatggccgcgtc
acggtcgatatgggtgcgcctcagctggatccggccaaggtgccgttcacgaacgacggt
ctgcaggccgagactctgggttcgacgcaaaaatggcctctgacgcttgatactcctttg
cagccggctacagtctggatagcagccgtttccatgggcaatccgcatgcggtgcagttg
gtggacgatgtggatgccgctttggtggggttgcacggcccgctgatagagaaccatgcc
cgttttcctcagcgtgtgaacgccggcttcatgcagatcctcaaccgcagtgaagtccgc
ttgcgtgtctatgaacgtggtgccggcgagaccctggcctgcggtacgggggcttgtgcc
gccgtggtggccggcattggctggggcctgctcgatcagcgcgtcgatgttcatacccgc
ggcggtctgctgaccattgaatggactggcggtgcgcacgatcgcgtgcgcatgaccggc
cctgccgaatttgtttttgaaggccagatcgacatacctgataccttatga
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