Comamonas thiooxydans: CtCNB1_4162
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Entry
CtCNB1_4162 CDS
T01109
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_4162
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CtCNB1_4162
Archaeal homologous recombinant proteins
CtCNB1_4162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Spidroin_N
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ACY34908
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Position
4676293..4677537
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AA seq
414 aa
AA seq
DB search
MRLLHTSDWHLGQHFMGRSRQAEHQALIDWLLTQVQAHAVDAVLIAGDIFDTGAPPSYAR
ELYNQLIVRLHDAGAALLILAGNHDSVSVLDESRELLTYLGAQVVSSTGDEARHVVTLPR
RGTAREPGCIVCALPFIRPRDVQQSQAGQSAQDKQQALQAAIASTYQRVYAAALQTQNEI
QASQGELLPIIATGHLTTVGASSNESVREIYVGALEAFPTNAFPPACYIALGHIHKPQLV
GGLDHIRYSGSPIALGFDEARQTKQVQLVDLNADGLQAVTALPVPMFQPMASIAGSLTHM
PALLKSASAQAQADRPVWLEVTVQEDDYLSDLTARVQAMAESLPVEILRIKRQRGQAAAQ
LSGEARESLDELTPLDVFARRLALESLEPPLQSALTERYQQVLHGLHDEQGAAA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttctccatacctccgactggcatctgggccagcacttcatgggccgcagccgt
caggccgagcatcaggccctgatcgactggttgctcacccaggtgcaggcccatgccgtg
gatgccgtgctgatcgccggcgacatcttcgacactggagccccgcctagctatgcgcgc
gagctgtacaaccagctcatcgtgcgcctgcacgacgcaggcgcggccttgctgatcctg
gcgggcaatcatgactcggtcagcgtgctcgatgaaagccgcgagctgctgacctacctg
ggcgcccaggtggtcagctcgaccggcgacgaggcccggcatgtcgtcacgctgcctcga
cgtggcaccgcgcgggagccgggctgcatcgtctgcgcactgcccttcatccgcccgcgt
gatgtgcagcaaagccaggccggacaaagcgcacaggacaagcagcaggcactgcaagcc
gcgattgcatccacctaccagcgcgtgtatgccgcagcccttcaaacgcagaatgagata
caggccagccagggcgaactgctgcccatcattgccaccggccatctgaccacggtgggt
gccagcagcaatgaatcggtgcgtgaaatctatgtaggcgcactggaggcttttccgacc
aatgctttcccgccagcctgctatatcgcccttggccatatccacaagccgcagctcgtc
ggcgggctcgatcacatccgctacagtggctcgcccatcgccctgggctttgacgaagcc
aggcagaccaagcaggtacagctggtggatctcaatgccgatgggctgcaggccgtcacc
gccctgcccgtgccgatgttccagcccatggcctccatcgccggcagtctgacgcacatg
cctgcattgctgaaatctgcctcggcccaggcacaagccgatcgaccggtctggctggag
gtgacggtacaggaagacgactatctctccgacctcacagcgcgcgtgcaggccatggcc
gagtcgctgcccgtggagattctgcgcatcaagcgtcagcgcggccaggctgcggcacag
ctgtccggcgaagcccgcgagtcgctggatgaactcacccccctcgatgtgtttgcgcgc
cgactggccctggagagcctggagccgccgctgcaatcggcgctgaccgagcgctatcaa
caggtgctgcacggcctccacgacgagcaaggagcagcggcatga
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