Comamonas thiooxydans: CtCNB1_4163
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Entry
CtCNB1_4163 CDS
T01109
Name
(GenBank) SMC protein-like protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_4163
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CtCNB1_4163
Archaeal homologous recombinant proteins
CtCNB1_4163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
ABC_tran
nSTAND3
AAA_21
AAA_27
AAA_15
DUF87
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ACY34909
LinkDB
All DBs
Position
4677534..4680965
Genome browser
AA seq
1143 aa
AA seq
DB search
MRILKLRLKNLNSLKGEWNIDFTAAPFADNGLFAITGSTGAGKSTLLDAICLALYHQTPR
LDSISGSNDIMTRHTGECEAEVEFEVKGVAYRAFWSQRRARGKPDAALQAPRVELALVAD
GSILTTHIKDKTRRIAEITGLDFARFTKSMLLAQGGFAAFLQATANERAELLEELTGTDI
YGRISQSVFERARDARQALEKQQAQAQGMQLLDAGTREQLQSQAALLQTGLTDLQARHQQ
LQTVQRWQAQTMQAMEEVEQARNAQANAQQALSDAAQDLLRLQAHGPAQAIQPMHHRWQL
AQDQQSEQAAQLQQLHTLRLRAQSAQWHQHQQARQLAGDQLQQSRLQLQSAQARQADLTA
WQQAHASHALLGENLSGWREQLQQGQQLQRQTVQTEGQMTQLQKLARQLQQQADAQTQQS
TQSTRQVSQTLQQQQAAEQALQQQLTTHGSLSQLRSHWQNAERQLHHWQQLQEHAALRQP
LDVQQQRNSQALSSVDSRIQEQLAQRDDLRAQYKALKEKVADKQALLDQERLIQSLQEHR
AALQPGDACPLCGSQDHPAITEYAALDVSATAAALQQAQSELESLQRQGEQLNTALATAQ
GQRQQQQEQHQAIAQQIEKWLSRWADLRAQSAVPLDEAAWQQPEALRTARAEAGQQIVQL
QQNLADAETAERQLQQSKDACQAALQHQQQIEYAQASTRQALQNNLTQQEQTAQALQALM
QQAGGLQTRLQLALQTAGYALPDSADTADWLDARQQEWQQWQRQQQAMQELTQQIDLLQR
QVEQAAQDAEHWLQRSQALPDMSADATAYTVPAAATLQDCRVLLEQTAQQLARLQGQASQ
AQATLEQLQQSTRQAQAEWQQALQASPFSDEAQYTAALLSDAEQQGLQALSNQLQGAAQR
AAALQADASQRLTALQTQALSDEAPETITEQITQLETERAQQAEQLGAHRARLKDDDDRR
AGQQALLARIAEQEQDSDLWQHLDSLIGSARGDKFRKFAQGLTLDHLLHLANRHLERLHG
RYLLRRKPTGELELDIVDGWQGDVARDTRTLSGGEAFLVSLALALALSDLVSSKTSIDSL
FLDEGFGTLDGDTLEMALAALDTLNASGKMIGVISHVEALKERIPAQIRVEKAAGIGYSR
LVI
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctcaaactgcggctgaagaacctgaactcgctcaagggcgagtggaacatc
gacttcaccgctgccccctttgccgacaacggcctgtttgccatcaccggatccacgggc
gctggcaagtccacgctgctcgatgccatctgccttgcgctctatcaccagacgccgcgc
ctcgacagcatcagcggcagcaacgacatcatgacgcgccacaccggtgagtgcgaagcc
gaggtggagttcgaagtcaagggcgtggcctaccgcgccttctggagccagcgccgcgcg
cgcggcaagccggatgccgccctacaagctcccagggtggagctggcactggtggcggac
ggcagcatactcaccacccatatcaaggacaaaacccggcgcatcgccgaaatcaccgga
ctggactttgcgcgctttaccaagtccatgctgctggcccagggaggctttgccgccttc
ttgcaggccacggccaatgagcgcgccgagctgctcgaagaactgaccggcaccgatatc
tacggtcgcatctcgcagtccgttttcgaaagagcgcgcgacgcccgccaggccctggaa
aagcaacaggcccaggcacagggcatgcaactgctggatgcaggcacacgcgagcagctg
caatcccaggcggcactgctgcagaccggcttgacggatctgcaggcacgccaccagcaa
ctgcaaaccgtacaacgctggcaggcacagaccatgcaggccatggaggaggtggagcag
gcacgcaatgcacaagcaaacgcccagcaagcgctgagtgatgcagcacaagatttgctg
cgcctgcaggcccacggacccgcgcaggcaatccagcccatgcaccatcgctggcagctg
gcacaagaccagcaaagcgaacaggccgcgcaattgcagcaactgcataccctgcggctg
cgagcccaaagcgcgcaatggcatcaacaccaacaggcccggcaactggctggcgatcag
ctgcagcagtcaaggctgcagttgcagtctgcacaggcccggcaggccgacttgacggca
tggcagcaagcccatgccagccacgccctgctgggtgaaaacctcagcggctggcgcgag
cagctgcagcaaggccagcaactgcaacggcaaaccgtccagacagaaggccagatgacg
cagctgcagaagctcgcccggcaactgcagcagcaagcagacgcacagacgcagcaatcc
acgcagtcgacacggcaagtctcccagacgctgcaacagcagcaggccgcagagcaagcc
ctgcagcagcagctgaccacgcacggcagcctgtctcagctgcgcagccactggcaaaac
gcagagcgccagctgcatcactggcagcagttgcaggaacatgccgcactgcgccagccc
ctggacgtgcagcagcagcgcaattcgcaggcgctgagctccgttgattcccgcattcag
gagcagctggcgcaacgcgatgacttgcgtgcgcagtacaaggctctcaaggaaaaggtg
gccgacaagcaagccctgcttgaccaggagcgcctcatccaaagcctgcaagagcaccgc
gctgcgctgcagcccggagatgcctgcccgctgtgcgggtctcaggatcacccagccatc
accgaatacgcggcgctggatgtatcagccacagccgctgcgctgcagcaggcacagagc
gaactcgagtcgctgcagcgccagggcgagcagctgaacaccgcgctggccactgcccag
ggccagcggcagcagcagcaggagcagcaccaggccattgcccagcagattgaaaaatgg
ctgtcacgctgggctgacttgcgcgcgcagagcgcagtgccgctggatgaggcggcatgg
cagcagcccgaagcactgcgcaccgctcgcgctgaagccgggcagcagattgtgcagctg
cagcagaacctggccgatgccgaaactgccgaacgccagctgcaacagtccaaggacgcc
tgccaggcggctctgcaacaccagcagcagatcgagtatgcacaggccagcacccggcag
gctctgcagaacaatctgacgcagcaggagcagaccgctcaggcactgcaagccttgatg
cagcaggccggcggcctgcaaactcgcttgcagcttgccctgcagacggcaggctacgca
ttgcccgacagcgcagacaccgcagactggctggatgcgcgtcagcaggaatggcagcaa
tggcagcgccagcaacaggcaatgcaagagctgacccagcagatcgacctgctgcaacgc
caggtcgaacaagccgcgcaagatgccgagcactggctgcaacgcagccaggccctgcct
gacatgtccgccgacgccaccgcctatacagtgccagccgccgccacgctgcaggactgc
agagttctgctcgaacaaacagcgcagcaactggccaggctgcaaggtcaggcaagccag
gcacaagccacgcttgagcagctgcagcaatcgacgcggcaggcccaggccgaatggcag
caggcgctgcaggccagcccgttctccgacgaagcgcagtacaccgcagccctgctgtcc
gatgccgaacagcaaggtctgcaggcactgagcaaccagcttcagggcgcggcacaacgc
gcagccgccttgcaggcagacgccagccagcgcctgaccgcactgcagacacaggcgctc
agcgacgaagcacccgaaaccattaccgagcagattacccagctggagaccgaacgcgcc
cagcaagccgagcaactgggcgcccaccgcgcccgcctcaaagatgacgatgaccgccgc
gcgggccagcaagccttgctggcccggattgccgagcaggaacaggacagcgatctctgg
caacacctggacagcctgataggctccgccagaggcgacaagttccgcaagttcgcacag
gggctgacgctggatcatctgctgcatctggccaaccgacacctggagcgcctgcacggt
cgctatctgctgcggcgcaagcccactggcgagctggagctggacatcgtggacggctgg
cagggcgatgtggcgcgcgacacgcgcacgctctcgggcggcgaggcctttctcgtcagc
ctggcactggcactggcactgtccgatctggtcagcagcaagacctcgatcgattcgcta
ttcctcgacgaaggcttcggcacgctggacggcgatacgctggagatggccctcgccgcg
ctcgatacactcaacgccagcggcaagatgattggcgtcatcagccatgtggaagcgctc
aaggagcgcattccggcgcagatccgcgtggaaaaagcagccggaatcggctactccaga
ctggtgatctga
DBGET
integrated database retrieval system
