Comamonas thiooxydans: CtCNB1_4400
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Entry
CtCNB1_4400 CDS
T01109
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctt03000
]
CtCNB1_4400
Transcription factors [BR:
ctt03000
]
Prokaryotic type
Helix-turn-helix
Other families
CtCNB1_4400
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA
Mg_chelatase
AAA_5
AAA_2
HTH_8
AAA_22
AAA_16
AAA_19
AAA_7
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ACY35146
LinkDB
All DBs
Position
4943557..4945143
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AA seq
528 aa
AA seq
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MTTSHILNAVSPLIADLAQDLSERERLRRLLAALRNLLPADAVALLKLEGEWLRPMAIDG
LMPDTLGRRFRLGEHPRFAQLLAAGQAMRFEPDSPLPDPYDGLVAHKGQAISELHVHDCM
GCVLQLGGLPWGLLTLDALEPGRFAHPAALAMLQAFSNLAAATVATAERVHQLSQLARGA
TGSARAAAPQERGLQGASPVMRQLQKDIALVAASDLCVLVTGETGTGKELVAQAVHAQSG
RADKPMISINCAALPDNLVESELFGHVRGAFTGALSERSGKFEQAHQGTLFLDEVGELSL
PVQAKLLRVLQSGQLQRLGSDREHHVDVRVIAATNRDLAAEVGAGRMRADFYHRLNVYPL
AVPPLRERDSDVLQLAGYFLEENRSRLRLGGLRLDAAAQAALLNRSWPGNVRELEHCISR
AVLRALSRHDGSASRAGTRLRIVTLGLADLWERAEAPAAAQATASMDPATAAVAPEAGLR
AAVSAYERQLVSSSLARHRGSWAAAARELQLDRANLQRLAKRLEIDRP
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatctcacattctcaacgccgtcagcccgctgatcgccgatctggcccaggac
ctgtccgagcgcgaacgtctgcgccgtctgctggccgcactgcgcaatctgttgcccgcc
gatgccgtagccctgctgaagctcgaaggcgaatggctgcgccccatggcgatcgacggc
ctgatgccggacacgctgggccggcgctttcgcctgggcgagcatccgcgctttgcccag
ttgctggcggccggccaggccatgcgcttcgaacccgacagtcccctgcccgatccctat
gacgggctggtggcgcacaaaggccaggccatcagcgagctgcatgtgcatgactgcatg
ggctgcgtgctgcagctgggcggcctgccctggggtctgctgacgctggacgcactggag
ccgggccggttcgcccaccccgcggcgctggccatgctgcaggccttcagcaatctggcc
gcagccaccgtggccacggccgagcgcgtgcaccagctgtcccagctcgcgcgcggcgcc
accggctcggccagagcggccgcgccgcaggagcgcggactgcagggtgcaagccctgtc
atgcgccagttgcagaaagacattgccctggttgccgccagcgatctttgcgtgctcgtc
accggcgaaaccggcaccggcaaggaactggtagcccaggcagtgcatgcgcagtcgggc
cgtgccgacaagcccatgatcagcatcaactgcgcggccctgcccgacaacctggtcgag
agcgagctgttcggccatgtgcgcggggccttcacgggagcactgagcgagcgcagcggc
aagttcgagcaggcgcatcagggcacgctgttcctggacgaggtcggcgaactctcgctg
cccgtgcaggccaagctgctgcgcgtgctgcaaagcggccagctgcagcgcctgggctcg
gaccgggagcaccatgtggatgtgcgcgtgatcgccgccaccaaccgcgatctggctgcg
gaagtcggcgccgggcgcatgcgcgcggacttctatcaccgcctcaatgtctatccgctc
gccgtaccgccgctgcgcgagcgcgacagcgacgtgctgcagctggcgggctatttcctc
gaggagaatcgatccagactcaggctcggcggcctgcgcctggatgcggccgcacaggcg
gccctgctcaatcgcagctggcccggcaatgtgcgcgagctcgagcactgcatcagccgc
gccgtgctcagggccctgagccgccatgacggcagcgccagccgcgcgggaaccaggctg
cgcatcgtgaccctgggacttgccgatctctgggagcgggccgaggcgcctgccgccgca
caggccacagcatccatggacccggccacagctgcggtggcgcccgaggccggtctgcgc
gcagccgtcagcgcctatgagcgccagctggtcagctccagcctggcccgccaccggggc
agctgggccgccgcagcgcgcgagctgcagctcgatcgagccaatctgcagcgcctggcc
aagcggcttgagatcgacaggccttga
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