Comamonas thiooxydans: CtCNB1_4461
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Entry
CtCNB1_4461 CDS
T01109
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CtCNB1_4461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_4461
Enzymes [BR:
ctt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CtCNB1_4461
DNA repair and recombination proteins [BR:
ctt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CtCNB1_4461
Prokaryotic type
CtCNB1_4461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACY35207
LinkDB
All DBs
Position
complement(5001783..5002520)
Genome browser
AA seq
245 aa
AA seq
DB search
MNFTSLSMSANTAAPTQLMSADPQDWPVSPDWQAVVDSFFAGSTGQGLLQFLQQRLDAGA
VIFPPKPLRALELTPAEEVRVVILGQDPYHGRGQAEGLAFSVAPGVRVPPSLQNIFKEMQ
RELGTPFPAFPQPGGSLVSWAQRGVLLLNTSLTVEEGQAASHAKKGWEELTDAIIRRVAE
QGRPTVFMLWGSHAQSKRVFIPQDRGHLVLMSNHPSPLSALRPPVPFIGNGHFGKAREFK
LRHGY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcactagcctgagcatgagtgctaacaccgctgcgcctacacagttgatgagt
gcagatccgcaggactggcctgtctcgccagactggcaagccgttgtcgactctttcttt
gcagggagcacaggccagggcttgctgcagtttttgcagcaaagactggatgcaggggcc
gtgattttcccacccaagcccctgagggccctggaattgacacccgccgaggaggtgcgt
gtcgtgatcctggggcaggacccctatcatggtcgtgggcaggccgagggtctggcattt
tctgtagcacccggggtgcgcgttccgccatcgctgcagaacatcttcaaagaaatgcag
cgcgaactgggcacgccgtttccggcgtttccccagccaggcggcagcctggtgagctgg
gctcagcgtggtgtactgctgctcaacaccagtctgacggtggaagaagggcaggccgca
agccatgccaaaaaaggctgggaagagctgaccgacgccatcatccgccgggtggcagag
caggggcggcccacggtcttcatgctctggggctcgcacgcccagtccaagcgtgtgttc
attcctcaggatcgtggccatctggtgctgatgagcaaccacccttcaccgttatcggcc
ctgaggcctcccgtgccctttatcggtaacggacacttcggcaaggccagggagttcaag
ctcagacacggctattga
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integrated database retrieval system
