Cronobacter turicensis: CTU_02190
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Entry
CTU_02190 CDS
T00999
Symbol
rho
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
ctu
Cronobacter turicensis
Pathway
ctu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTU_02190 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctu03021
]
CTU_02190 (rho)
03019 Messenger RNA biogenesis [BR:
ctu03019
]
CTU_02190 (rho)
Transcription machinery [BR:
ctu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CTU_02190 (rho)
Messenger RNA biogenesis [BR:
ctu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CTU_02190 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CBA27021
UniProt:
C9Y4T4
LinkDB
All DBs
Position
240065..241324
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atgggactggaaaacctggcccgcatgcgcaaacaggatattattttcgccatcctgaaa
cagcatgcgaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaggat
ggcttcggcttcctccgttctgcagacagctcctacctcgccggtcccgacgacatctac
gtttctcccagccaaatccgccgtttcaacctccgtacaggggataccatctccggtaag
attcgtccgccgaaagaaggcgagcgctacttcgcgctgttgaaagtgaacgaagtcaac
ttcgataaaccggaaaacgcacgtaataagatcctgttcgaaaacttaacgccgctgcac
gccaactctcgtctgcgcatggagcgcggcaacgggtcgaccgaagatttgacggcgcgc
gtactggatctggcatccccgatcggccgcggtcagcgtggtcttatcgtggcgccgccg
aaagcgggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcctataaccatccg
gattgcgtcctgatggtactgctcatcgacgaacgtccggaagaagtaaccgagatgcag
cgtctggtgaaaggcgaagtggttgcgtccacgtttgacgaaccggcttcccgccacgtt
caggtcgccgagatggttatcgagaaggccaagcgcctggtcgagcacaaaaaagacgtt
atcattctgctcgactccatcacccgtctggcgcgcgcttacaacaccgtcgtgccggcc
tccggcaaagtactgaccggtggtgtggacgcgaacgccttgcatcgtccgaagcgtttc
ttcggtgcggcgcgtaacgtggaagagggcggcagcctgaccatcattgcgactgctctg
attgataccggctcgaaaatggatgaagttatctacgaagagtttaaaggcaccggtaac
atggaactgcacctctctcgtaagatcgcggaaaaacgcgtcttcccggctatcgattac
aaccgttccggtacccgtaaagaagagctgctgacgactcaggaagaactgcagaaaatg
tggatcctgcgtaaaattattcacccgatgggtgagatcgacgcgatggaattcctcatt
aataaactggcgatgaccaaaactaacgacgaattcttcgacatgatgaaacgttcgtag
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