Cronobacter turicensis: CTU_03760
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Entry
CTU_03760 CDS
T00999
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ctu
Cronobacter turicensis
Pathway
ctu02020
Two-component system
ctu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CTU_03760 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CTU_03760 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctu03021
]
CTU_03760 (rpoN)
Transcription machinery [BR:
ctu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CTU_03760 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CBA27335
UniProt:
C9XTZ3
LinkDB
All DBs
Position
complement(426851..428290)
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AA seq
479 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQE
TQDSEGLDTAEALEQKEMPDELPLDASWDEIYTAGTPSGTGTDYIDDELPVYQGETTQSL
QDYLMWQVQLTPFTDTDRAIATAIVDAVDDTGYLTVTVQDILDGMGDNDDDIGPEEIEAV
LKRVQRFDPVGVAARDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRV
TRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNADSIPRLK
INQQYAAMSGSARNESDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFDQG
EEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASST
AIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactaaggctaagccaacagctcgccatgacgccgcagttgcag
caggccatccgcttgttgcaattgtccacgctggagcttcagcaggagctgcaacaggcg
ctggagagcaatcccctgcttgagcaaaccgacattcacgacgaaattgccactcaggaa
acgcaggacagcgaagggctggatactgccgaagcgctggaacaaaaagagatgcccgac
gagctgccgcttgacgccagctgggatgaaatctacaccgcgggcaccccgtctggcacc
ggcactgactatatcgatgacgagctgccggtttatcagggcgaaaccacccagagcctg
caggattacctgatgtggcaggtgcagttaacgccctttactgataccgatcgcgccatc
gccacggcgattgtcgatgcggtggacgataccggctatctcaccgtaacggtgcaggat
attctcgacggcatgggcgataacgatgacgacatcggccctgaagagatcgaagccgta
ctcaagcgcgttcagcgtttcgatccggtaggcgtcgccgcccgcgatctgcgcgactgc
ctgttgatccagctttcgcagtttagcgccgaaaccccttttctcgcgcaggcgcgccag
atcgtcagcgatcacctcgatctgctggccaatcatgatttccgcagcctgatgcgtgtc
acacgccttaaagaagacgtgctgaaagaagcggtcaatcttattcagtcgctcgatccg
cgccccggacagtcgatccagaccggcgagccggaatatgtcatcccggacgtgctggtg
cgcaagcataacggccgctggacggtcgaactcaatgccgacagcatcccccggctcaaa
atcaatcagcagtacgccgccatgtctggcagcgcgcgtaacgaatccgacagccagttc
atccgcagcaatcttcaggaagctaaatggcttatcaaaagtctggagagccgtaacgac
acgctgctgcgcgtcagccgttgcatcgtcgaacagcagcaagcgttcttcgatcagggc
gaagagtatatgaagccgatggtgctggccgatattgctcaggcggttgagatgcatgaa
tccaccatctcccgcgtcaccacgcaaaaatatctgcacagcccgcgcggcatctttgaa
ttaaagtattttttctcaagccacgtgaacactgagggcggcggcgaagcctcgtccacg
gcaatccgcgcgctggtgaaaaagttgattgcagcggaaaaccccgcgaaacccttaagc
gacagcaagctaacgtctatgctgtcagaacaaggaatcatggtggcccgccgtaccgtt
gcgaagtatcgagaatctttatccataccgccgtcaaatcagcgcaaacagctggtctga
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