Cronobacter turicensis: CTU_16780
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Entry
CTU_16780 CDS
T00999
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ctu
Cronobacter turicensis
Pathway
ctu03030
DNA replication
ctu03430
Mismatch repair
ctu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTU_16780 (holB)
03430 Mismatch repair
CTU_16780 (holB)
03440 Homologous recombination
CTU_16780 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctu03032
]
CTU_16780 (holB)
03400 DNA repair and recombination proteins [BR:
ctu03400
]
CTU_16780 (holB)
Enzymes [BR:
ctu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTU_16780 (holB)
DNA replication proteins [BR:
ctu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTU_16780 (holB)
DNA repair and recombination proteins [BR:
ctu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTU_16780 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
CBA29966
UniProt:
C9Y1I8
LinkDB
All DBs
Position
1770403..1771431
Genome browser
AA seq
342 aa
AA seq
DB search
MGAGAEIMKWYPWLRPSFEHLVGNWQAGRGHHAVLIHALPGMGDDALIYALSRWRMCQQP
QGQKSCGECRACQLMQAGTHPDYYQAEPEKGKSTLGIDAIRDISEKLYDRARLGGAKVVW
IKEAAQLTEAAANALLKTLEEPPENTWFLLGCREPEQLPATLRSRCFSWHLAPPETRYAE
AWLAREIQAEPSRINAALRLTGGAPAAALELLQPEQWQQRVALGEKITAALTSGDWLSLL
PALNHEQAPFRLHWLAAFLMDALKWRHGAQAALVNTDYPVLVAQLAQRFSPAVTQAMLDS
LFRCRDRLLNVAAVNRELLLTELLLTWERYMRPDAVLPSYHL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ctgggtgcaggagcagaaataatgaaatggtatccgtggctgcgcccctcgtttgagcat
ctggtcggtaactggcaggccggcaggggacaccatgcggtattgatccatgcgctgccc
ggtatgggcgacgacgcgctgatttacgcgttgagccgctggcgcatgtgccagcagccg
cagggccagaaaagctgcggcgaatgccgcgcctgccagctgatgcaggcgggcacgcac
ccggattattatcaggcggagccggagaagggcaaatcgactctgggcatcgacgctatc
cgcgatatcagcgagaagctttacgatcgcgcgcggctcggcggcgccaaagtggtctgg
atcaaagaggcggcgcaactgacggaagcggcagcgaacgcgctgctgaaaacgctggaa
gagccgccggaaaatacctggtttttgctgggctgccgcgagccggaacagctgcctgcc
acgcttcgtagccgctgcttcagctggcatctggcaccgcccgaaacgcgctatgccgaa
gcctggcttgcgcgcgagatccaggcggagccgtcgcggattaacgccgcgctgcgtctg
accggcggcgcgcccgccgccgcgcttgaactgctccagccggagcagtggcagcagcgc
gtggcccttggcgagaaaatcacggcggcgctgacgagcggcgactggctctctttatta
cctgcgctgaaccatgaacaggcgccttttcgcctgcactggctggcggcgttcctgatg
gacgcgctgaagtggcgtcatggcgcccaggcagcgctggtcaacactgattatccggtg
ctcgtggcccagctggcgcagcgtttttcaccggccgtcactcaggcgatgcttgattcg
ctattccgttgccgcgacaggctgctaaacgtcgccgccgtcaaccgcgaactgctgctg
accgaactgttactcacctgggagcgctatatgcgccctgacgcggtgcttccttcttat
cacctctga
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