Cronobacter turicensis: CTU_23290
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Entry
CTU_23290 CDS
T00999
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ctu
Cronobacter turicensis
Brite
KEGG Orthology (KO) [BR:
ctu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctu03016
]
CTU_23290 (rnb)
Enzymes [BR:
ctu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CTU_23290 (rnb)
Transfer RNA biogenesis [BR:
ctu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CTU_23290 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
CBA31263
UniProt:
C9XTL4
LinkDB
All DBs
Position
2437392..2439326
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
IAVIHTEKEKESAEPEELIEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIPCRAERGVSH
DFQNGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEREAPDGVAT
EMLDENLTREDLTALDFVTIDSASTEDMDDALYVETLDGDRLQLTVAIADPTAWIAEGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLREGVQRPALVCRMIIDAEGAISDEIHF
FAATIESKAKLAYDDVSNWLEEKGDWQPGSEAIAAQIRLLQQICQRRSAWRVKNALVFKD
RPDYRFVLGEKGEVLDIIAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHAGFD
PASTEQLATLLQSHGMHVDASDVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESAARPQEESTVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSVIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgcttgcgcagcttaaacagcaactgcattcccagacgccg
cgcgccgaaggggtagtaaaagccacggaaaaaggttttggtttccttgaggttgacgcg
cagaaaagctacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgcgtc
attgccgttatccatacggaaaaggaaaaagaatccgccgagcccgaagagcttatcgaa
cccttcctgacccgctttgtgggccgggtacaaaagaaagacgatcgtctctctatcgtt
cccgatcatccgctgctgaaagacgccatcccgtgccgcgctgaacgcggcgtcagccat
gatttccagaatggcgactgggcggtggcggagatgcgccgtcatccgctgaaaggcgat
cgcggcttttacgcggaactgacccagtttattaccttcggcgacgaccatttcgtgccg
tggtgggtgacgctcgcacgccataatcttgagcgcgaagcgccggacggcgtggcgacc
gagatgcttgatgaaaacctgacgcgtgaagatttaaccgcgctcgatttcgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtacgttgaaacgctggatggcgac
cgcctgcaactgaccgttgcgattgccgatccaaccgcgtggatcgccgaaggcagcaag
ctcgacaatattgccaaagtgcgcgcattcaccaactacctgccgggctttaacatcccg
atgctcccgcgcgaactttccgacgatctctgctcgctgcgtgaaggcgtacagcgcccg
gcgctggtgtgccgcatgattatcgacgcggaaggcgctatcagcgatgagatccacttc
ttcgccgcgaccatcgaatcgaaagccaagctggcgtatgacgacgtctccaactggctg
gaagaaaaaggcgactggcagccgggcagcgaggcgatcgccgcgcagatccgtctgcta
cagcagatttgccagcgccgcagcgcctggcgtgtgaaaaacgcgctggtgtttaaagac
cgtccggattaccgcttcgtactgggcgaaaaaggcgaagtgctggatatcattgccgag
ccgcgccgcatcgctaaccgtatcgttgaagaatccatgatcgccgcgaatatctgcgcc
gcgcgcgtgctgcgcgacaagctgggcttcggcgtttataacgtgcacgcgggcttcgat
ccggccagcaccgaacagctggcgacgctgctgcaaagccacggcatgcacgtggatgcc
agtgacgtgctgaccctgccaggcttctgcaagctgcgccgtgagctcgatgcgcagccg
tccggtttcctcgacagccgtattcgccgcttccagtcatttgcggaaatcagcaccgag
ccaggcccgcactttggcctgggccttgaagcttacgcgacctggacctcgccgattcgt
aaatatggcgatatggtcaaccaccgtctgctgaaagccatcatcaaaggcgaaagtgct
gcgcgtccgcaggaagagtccaccgtgcagatggcagagcgccgtcgtctcaaccgcatg
gcggagcgcgatgtgggcgactggctgtatgcccgtttcctgaaagacaaagccggtacc
gatacccgcttcgcggcggaaattatcgatgtcagccgcggcggcatgcgcgtgcgtctg
gtggataacggcgcggtcgcctttattccggcgccgttcctgcacgcggtacgtgatgaa
ctggtatgcagccaggaaaacggcaccgtacagattaaaggcgaaaccgtttataaggtc
accgacgttatcgacgtgaccatcgccgaagtgcgtatggaaacccgcagcgtgatcgca
cgcccggtcgcctga
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