Cronobacter turicensis: CTU_37940
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Entry
CTU_37940 CDS
T00999
Symbol
rtcR
Name
(GenBank) Transcriptional regulatory protein rtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
ctu
Cronobacter turicensis
Brite
KEGG Orthology (KO) [BR:
ctu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctu03000
]
CTU_37940 (rtcR)
Transcription factors [BR:
ctu03000
]
Prokaryotic type
Other transcription factors
Others
CTU_37940 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
AAA_16
AAA_22
NACHT
MCM
AAA_2
AAA_19
AAA_14
T2SSE
AAA_33
AAA_7
ATPase_2
ABC_tran
AAA_10
AAA_25
AAA_30
BrxC_BrxD
TsaE
AAA_29
AAA_18
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
CBA34111
UniProt:
C9Y1I3
LinkDB
All DBs
Position
3951638..3953230
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AA seq
530 aa
AA seq
DB search
MQKRRVVIGMLGTVLDRRGKRANRWNKWRPSVALCQQPGLPVDRFELLYQARDASLAERV
MEDIAIVSPHTEMRPHTVVMDDPWDFEEVYAALLDFATRYPFDTDNEEYLVHITTGTHVA
QICWFLLTEARYLPAALLQTSPDRRGEDDEQKTIGTASVIDLDLSRYATLTSRFQREQQQ
SVSFLKSGIDTRNATFNRLIDQIERVALRSTAPILLTGPTGAGKSFLAKRIFQLRQARHL
VQGKLVSVNCATLRGDNAMSTLFGHVKGAFTGAQQARPGLLREADGGVLFLDEIAELGLD
EQAMLLKAIEEKTFFPFGSDKEAQSDFQLIAGTHRDLATWVAEGRFREDLYARINMWAFA
LPGLAQRREDIAPNVEYELQRFSAQQQTQIRFDKTARENYLAFACSPQARWPGNFRELGS
SVARMATLAEQGRITDALVEEEIARLTASWQPPAGPAAALPVDTATLDLFDRDQLAAVVA
VCRRSASLSEAGRTLFAVSRQKKANPNDADRLRKYLARFGLSWEQVHAPE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcgtcgcgtggtgattggcatgttgggcaccgtgctggaccggcgcggtaaa
cgcgccaaccgctggaataaatggcgtccgtccgtcgcgctgtgccagcagcccggttta
cctgtcgaccgctttgaactgctgtatcaggcccgcgacgcgtcgctcgcagagcgggtg
atggaagatatcgcgatcgtttctccgcataccgaaatgcgtcctcataccgtggtgatg
gacgatccgtgggattttgaggaggtgtatgccgccctgctggatttcgccacgcgctat
ccctttgacaccgacaatgaagagtatctggtgcatatcaccaccggtacgcacgtagcg
cagatctgctggttcctgctgaccgaagcgcgttatctcccggcggcgctgttacagacc
agccccgatcgccgcggcgaggatgacgagcagaaaaccatcggcacggcgtcggtcatc
gatcttgatttaagccgctatgccacactgacgagccgtttccagcgcgagcaacagcag
tcggtgtcgtttctcaaatccggcatcgacacccgtaacgctacctttaaccgcctgatc
gaccagatcgagcgcgtggcgctgcgatccaccgcgcccattctgctgacggggccgacc
ggcgcggggaaatcgttcctcgcaaagcgcattttccagctgcgccaggcgcggcatctg
gtacagggaaagctggtgtcggtgaactgcgcgacgcttcgcggcgataacgcgatgtcg
acgctgtttggccatgtgaagggcgcctttaccggcgcgcaacaggcgcggccagggctt
ttgcgcgaggccgacggcggcgtgctgtttctggatgaaatagccgagctggggctcgat
gagcaggcgatgctgctaaaagcgattgaggaaaaaaccttttttccgttcggctcggat
aaagaagcgcagagcgatttccagctgatcgccggcacgcaccgcgatctggcgacgtgg
gtcgctgaagggcgctttcgcgaagatctctacgcgcgcattaatatgtgggccttcgcg
ctgccgggcctcgcccagcgccgtgaggatatcgcgccgaacgtcgaatatgagctacag
cgcttctcggcgcagcagcagacgcagatccgttttgataaaaccgcgcgtgaaaattat
ctcgccttcgcctgctcgccacaggcgcgctggccgggcaactttcgcgagctgggcagc
tcggtggcgcgcatggcgacgcttgccgaacaggggcgtattaccgacgcgttagtcgag
gaagaaatcgcccgccttaccgcaagctggcagccgcccgcaggccccgccgccgcgctg
cccgtcgataccgcgacgctcgatcttttcgaccgcgaccaactggcggcggttgttgcc
gtgtgccggcgcagcgcctcgctctccgaggccggacgcacgctgtttgcggtttcgcgc
cagaagaaagccaatcccaacgacgccgaccgcctgcgtaaatatctggcgcgctttggg
ctgagctgggagcaggttcacgcgcctgaatga
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