Corynebacterium tuberculostearicum: I6I74_00575
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Entry
I6I74_00575 CDS
T07593
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ctub
Corynebacterium tuberculostearicum
Pathway
ctub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I74_00575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctub03019
]
I6I74_00575
Messenger RNA biogenesis [BR:
ctub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6I74_00575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QQU81930
LinkDB
All DBs
Position
complement(116640..118790)
Genome browser
AA seq
716 aa
AA seq
DB search
MNEPRNRSRKVTRKAGPPAENETASNEAASPVFQAPATDAGNSAQDNSAKGDKDNSGKKN
SSDNHNEGGGNNRRSRSRGSRGRGRGGNGNGNGNNHGGNNNHGGKNGNGNGKNGNGKGRG
RNNRGRRNVPKSMQGADLTKRLPEPPKQPKDALRIYALGGISEIGRNMTVFEYGDDLIII
DCGVLFPSSGEPGVDLILPDFGPIEKKIHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIV
ASRFTIALIAAKCKEHRQKPKFVEVNEKSDVTYGPFRVRFWAVNHSVPDALGIMLGTPAG
NIIHTGDIKLDQTPLDNRPTDLPALSRYGDEGVDLMLCDSTNATVPGVSASEGDIPANFK
RLVAGAKQRVILASFASNVYRVQAAIDAAVANGRKVAFNGRSMMRNMEIAEKMGFLKVPR
GTIIPIDEAAKMAPHKTMLITTGTQGEPMAALSRMARREHRQITVRDGDTIIFSSSLIPG
NEEAVYGVINMLSQIGANVITNQDVKVHASGHGYAGELLFLYNAARPRNAMPVHGEWRHL
RANKELAISTGVDRDRTVLAQNGVVVDLRKGRAEVVGQMQVGNLYVDGVSMGDVDADTLA
DRTNLGTGGVVSITCVIDNRTSRLLEHPTVSTTGFSDDDRGIVPEVAEMVENTMNDLAAE
GENDTYRMVQKLRRKVSKLMDSKYKREPVILPTIVPTNSGPLVTDEEDVDASRESL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaccccgtaaccgttcccgcaaggtgacccgcaaggcgggcccaccggcggaa
aacgaaaccgcctccaacgaggcggcttcgccagttttccaagccccagcaactgacgcg
ggcaattccgcgcaggataattccgctaagggcgacaaggataattctggcaagaagaat
tcttccgacaaccacaacgaaggtggcggcaacaaccgtcgctcccgttcccgtggcagc
cgcggacgtggccgtggtggaaacggcaacggcaatggcaataaccacggtggaaacaat
aaccacggcggcaagaacggcaatggcaacggaaagaacggcaatggtaaaggccgcggc
cgcaataaccgtggccgccgcaacgtgcccaagtctatgcagggcgcggatctgaccaag
cgcctgccggagccgccgaagcagccgaaggatgctctgcgcatctacgctctgggtggt
atctcggagatcggccgcaacatgaccgtcttcgagtacggtgatgacctcatcatcatc
gactgtggtgtgctcttcccatcctctggtgagccaggcgtggacctcatcctgcctgac
ttcggcccgattgagaagaagatccacaaggtcaaggccctcgtcgttacccacgcgcac
gaggaccacatcggtgctatcccgtggctgcttaagctccgtccggatatccccatcgtt
gcttcccgcttcaccatcgcgcttattgctgcaaagtgtaaggagcaccgccagaagccg
aagttcgtcgaggttaatgaaaagtccgacgtaacctacggtccgttccgcgtacgcttc
tgggcagtcaaccactccgtaccggatgccttgggcatcatgctgggaaccccagccggc
aatatcatccacaccggtgacatcaagctggaccaaaccccgctggataaccgtccaacg
gacctcccagccctgtcccgctatggcgatgagggcgttgacctcatgctgtgtgattcc
accaatgccaccgtccccggtgtttcggcatctgagggtgatattcctgccaacttcaag
cgcctcgttgctggcgctaagcagcgcgttatcttggcttccttcgcctccaacgtttac
cgcgtccaggccgctatcgacgctgccgtggcaaacggccgcaaggtggccttcaacggc
cgttcgatgatgcgcaacatggaaatcgcggagaagatgggcttcttgaaggttccacgc
ggcaccatcatccccatcgatgaggctgccaagatggctccgcataagaccatgctgatt
accaccggtacgcagggtgagccaatggctgctttgtcgcgtatggcccgccgtgagcac
cgccagattaccgtccgcgatggcgataccatcatcttctcctcctcgctcatcccaggc
aatgaagaggccgtgtacggcgtcatcaacatgctgtcccagatcggtgccaacgtcatt
accaaccaggacgtaaaggtgcacgcttccggtcacggttacgctggcgagctgcttttc
ctgtacaacgcagcgcgcccgcgcaacgcgatgccggtgcacggcgagtggcgccacttg
cgcgccaataaggaactggctatctccaccggtgtggaccgcgaccgtacggtgctggca
caaaacggcgtcgtcgtggatctgcgtaagggccgcgccgaggtcgtaggccagatgcag
gtgggtaacctgtacgtcgacggcgtatccatgggcgatgtggatgccgataccttggct
gatcgcaccaacctgggtaccggcggcgtggtttctatcacctgtgtgattgataaccgc
acctcgcgtctgctggagcacccaacggtatctaccacaggtttctccgatgacgaccgc
ggcatcgtgccggaggttgcggagatggtggaaaacaccatgaacgatcttgccgcagag
ggcgagaacgatacctaccgcatggtgcagaagctgcgccgtaaggtatccaagctcatg
gattccaagtacaagcgcgagccggttatccttccgaccatcgtgccgaccaactccggc
cctttggttaccgatgaagaagacgtcgacgcttcacgtgagtccctgtaa
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