Corynebacterium tuberculostearicum: I6I74_06960
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Entry
I6I74_06960 CDS
T07593
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ctub
Corynebacterium tuberculostearicum
Pathway
ctub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6I74_06960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctub03021
]
I6I74_06960
03400 DNA repair and recombination proteins [BR:
ctub03400
]
I6I74_06960
Enzymes [BR:
ctub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6I74_06960
Transcription machinery [BR:
ctub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6I74_06960
DNA repair and recombination proteins [BR:
ctub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6I74_06960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF6801
Motif
Other DBs
NCBI-ProteinID:
QQU80994
LinkDB
All DBs
Position
1474832..1478827
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDTESEIAERASKLESD
LAELEAAGAKADARKKVQNAADKEMQHIRERGEREIARLDEIWNTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLVRNFDLEAEAEELREIINNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEQAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKSEDEIGGN
GRFREAEEDKPATGVFSSYAEALMAYDRGTVGLQAPIKVRIDHLRPPKEIEEEQFPDGWT
KGQAWMGYTTIGRVMFNELLPWNYPYLEGIMVRKGGGSGNKVLIGDVVNDLANKYPMITV
AQVLDNMKDAGFYWATRSGVTITMSDVLVLPNKTEILESYEKEAERIERKYWEQGALTER
ERYDRLVELWKDATDTVGEAVENMYPDHNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSH
GDYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRE
EDCGTRQGVRVPIGEESGDKVVLSELWETSASGRVIATDVKDANGEVVAEAGSDLTEELT
QKLLDAKVTEVKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDDVVYEKLSKRQGLAQVRRPMESNPDAMIERSLKDGDHVETGDRLMRGAADPHDVLE
VLGRRGVEQHLINEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVIDAGTTDLLPGNLIDL
SEAKQLNAAQVAEGGEPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
KLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLDEDFTF
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgcatcggtctggccaccgcagacgatatt
cgtcgctggtccaagggcgaggtcaaaaagcccgagaccattaactaccgcaccctgaag
ccggagaaggacggcctcttctgcgagcgcatcttcggccccacccgtgactgggagtgc
gcttgtggcaagtacaagcgcgtccgctacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacatcgagctagctgctccg
gtaacccacatctggtacttcaagggcgttccttcccgcctgggctacctgctggacctg
gctccgaaggatctcgagcgcatcatctacttcgcggccaacatcatcacctccgtggat
gaagaggctcgccacaacgaccagtccaccctggaagcagagatgctcctggagaagaag
gacgttgaggacgataccgagtccgagatcgcagagcgcgcctccaagctggagtctgac
ctggctgagctggaagcagccggcgccaaggcagacgcccgcaagaaggtacagaacgct
gccgataaggagatgcagcacatccgcgagcgcggcgagcgcgagatcgcccgcctggat
gaaatctggaacaccttcatcaagctggctccgaagcagatgatcatcgatgagaccatc
tacgaagagctggttgaccgctacgaggattacttcaccggcggcatgggtgcagaagcc
atccagaccctggtccgcaacttcgacctcgaggctgaggccgaggaattgcgcgagatc
atcaacaacggcaagggccagaagaagatgcgtgccctgaagcgcctgaaggtcgttgct
gccttcctgcgctccggcaacgatccggccggcatggtgctggacgccatcccggttatc
ccgccagagctgcgcccgatggtgcagctggacggtggccgcttcgctacctccgacctg
aacgacctctaccgccgcgtcatcaaccgcaataaccgtttgaagcgcatgatcgacctg
ggtgctccagagatcatcgtgaacaacgagaagcgcatgctgcaggagtctgtggacgcg
ctcttcgataacggccgccgtggccgtccggttaccggcccgggcaaccgtccgctgaag
tccctgtctgacttgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactccggccgttccgttattatcgttggtccgcagctgaagctgcacgag
tgtggtctgccgaagctcatggcgctcgagctgttcaagccgttcgttatgaagcgcctg
gtagaaaatgactacgcccagaacatcaagtccgccaagcgcatggttgagcgccagcgc
ccagaggtatgggacgttctggagcaggccatttctgagcacccagtgatgctcaaccgt
gcacctacgctgcaccgcctgggtattcaggccttcgagccgaagctggttgagggtaag
gctattcagctgcacccgctggcttgtgaggcgttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgtccgctgaggcacaggctgaagcccgtgtcctgatgctg
gcgtccaacaacattctgtccccggcatccggtaagccgctggccatgccacgtctggac
atggttaccggcctctactacctgaccatggacaagtccgaggacgagatcggtggcaac
ggccgcttccgcgaggcagaagaggacaagccagctaccggcgtcttctcctcctacgct
gaggccctcatggcctatgaccgcggcaccgttggcctgcaggctccgatcaaggtccgc
atcgatcaccttcgcccgccgaaggagatcgaggaagagcagttcccggatggctggacc
aagggccaggcatggatgggctacaccaccatcggccgcgtcatgttcaacgagctgctg
ccatggaactacccgtacctcgagggcatcatggtccgtaagggcggcggctccggcaac
aaggtcctcatcggtgacgtggtcaatgacttggccaataagtacccgatgatcaccgtt
gctcaggtgctggacaacatgaaggatgccggcttctactgggcaacccgttccggcgtg
accatcaccatgtctgacgttctggttctgccgaataagaccgagatcctcgagtcttat
gagaaggaagcagagcgcatcgagcgcaagtactgggagcagggcgccctgaccgagcgc
gagcgctacgaccgcctggttgagctgtggaaggacgctaccgataccgtcggtgaggcc
gtcgagaacatgtacccggaccacaacccgattccgatgattgtgaagtctggtgctgcc
ggtaacatgcgtcagatctggacgctggccggtatgaagggcatggttgtgaactcgcac
ggtgattacatcacccgtccgattaagacctccttccgcgaaggcctgtccgtgctggag
tacttcaacaactcccacggttcccgtaagggcctggccgataccgcactgcgtaccgct
gactccggctacctcacccgtcgtctggtggacgtggcccaggacgtcatcgtccgcgaa
gaggactgtggcacccgccagggcgtccgcgtcccaatcggcgaggagtccggcgacaag
gttgttctctccgagctgtgggagacctccgcatccggccgcgttatcgcgaccgacgtc
aaggacgccaacggcgaggttgtggccgaggccggctccgacctcaccgaggagctcacc
cagaagctgcttgacgctaaggtcaccgaggtcaaggttcgctccgtgctgacctgccag
accccggccggcgtttgtgctaagtgctacggcaagtccatggcttccggccagctcgtc
gatatcggcgaggccgtcggcatcgtggctgcacagtccattggtgagccgggtacccag
ctgaccatgcgtacgttccaccagggtggtgtcggtggcgatattaccggcggtctgccg
cgtgttcaggagctcttcgaggcccgtaacccgaagaaccgcgctcctatcgcctccgtt
gacggcaccgtttccctgtccgatgagggcaacttctggaccttgaccatcaccccggat
gacggctctgatgacgtggtctatgagaagctctccaagcgtcagggcctggctcaggtt
cgtcgcccgatggagtccaacccagacgccatgattgagcgttccctcaaggacggcgac
catgttgagacgggtgaccgcctgatgcgtggtgcggctgacccgcacgacgtgctcgag
gtcctcggccgccgtggcgtggagcagcacctcatcaatgaggttcaggctgtgtaccgt
acccagggtgtggctatccacgataagcacatcgagatcatcatccgccagatgctgcgc
cgtggcaccgtcatcgatgcgggtaccacggacttgctgccgggtaacctcatcgacctc
tctgaggccaagcagctcaacgctgcccaggttgcagagggcggcgagccggctcagctg
cgctcggagatcatgggtattaccaaggcttccttggctaccgagtcctggctgtccgct
gcatcgttccaggagaccactcgcgtgcttaccgacgccgctattaacaagcgctccgat
aagctcattggcctcaaggagaacgtcatcattggtaagctgatcccagccggtaccggt
atctcccgctaccgcaacatctccgtcaagccgaccgaggctgcacgcaacgctgcatac
tcgattccgacttacggcgattccatctacggcgatgacggcttcggtgaattcaccggt
gcttccgtcccgctggatgaggacttcaccttctaa
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