Corynebacterium tuberculostearicum: I6I74_08375
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Entry
I6I74_08375 CDS
T07593
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctub
Corynebacterium tuberculostearicum
Pathway
ctub03420
Nucleotide excision repair
ctub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6I74_08375
03430 Mismatch repair
I6I74_08375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctub03400
]
I6I74_08375
Enzymes [BR:
ctub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6I74_08375
DNA repair and recombination proteins [BR:
ctub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6I74_08375
MMR (mismatch excision repair)
Other MMR factors
I6I74_08375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QQU81257
LinkDB
All DBs
Position
1759042..1762221
Genome browser
AA seq
1059 aa
AA seq
DB search
MPKSNYSPQQIAAALGKDFPPTEEQAHVIEGPFSPKLVVAGAGAGKTETMASRVVYLVAN
GYVRPEQVLGLTFTRKAAQQLEQRIRRQLIKLRDSSLIPPGGEVAEALENIAPKVATYDS
YAGELVREYGLLVPVEPTARIITETERYSLAYDVVRNYTGQLEDDRALATITETLLKFSQ
DIDNGLKDTSHIAEHARDFRADIDNLDKSQKNGPEYSQKLLEYIQTQERRVQYVPLLEAL
KKEQSERQVITFGEQMAVAARVARDHPVVGKQQSQRYKVVMLDEYQDTSYAQRVLLRSLF
GGEQKELSVTAVGDPMQAIYGWRGATSENLTAFVEDFPVAPGTPAPKDQLTTSWRNPSGA
LDLANLVAEGVFEGVERPVDELSAAPHKGEGDIQLAYFDSEVREREFVAEYLKEQWEKRE
GDTFSAAVLVRKNRHSAPIAAALDKAGVPNEIIGLGGLLWQPEIQDLVAIATMLVRPEDL
PAAVRVLAGPICGLGISDIQALASRQRNLAGAREERLRWEPGMDPEDYLRAQLEDVTAEE
PDQRVGLADALADLGERDRYTPQGLARMEEVSAKLRHLRTYSLSKPLVDIFADIEALFNI
RTEVLARGSAGGATHLDKFADMVAGFHGDSLYALLDYFALALEKEDGLDLGEVPAATDRV
QIMTAHKAKGLEWEHVCVVHADSSSYSAKAETFLTRIDKVPGDDDYIEVPEDAQKRSHFQ
NACEEFKNADSAIKAEESARLFYVALTRTESTLTITGSGTNNLNGKNKKAPYEYLERLKE
QFPQYVVEWSVPDEPSEDDFGESAQFPALEASPEAVAGADLVLAAMEELPDLSRGETFEL
WEQEAGALIEEYKALQQPVVDVELPSELTASDMVALRADPLQFARRQRRPVPFKPNSYAK
RGTAFHAWLEDRFGSPALLGEEELPGIDEPEDFDLEELKQAFLNSEWAERQPEHVEAPFE
ITIGESVVRGRMDAVFRLEDGTWMVVDWKTGRPPQGEAMDAAKIQLAVYAEAWRRIHGGE
KIRAAFYYVHDGYTFEPARLPRGEELKKLLESSVEHHKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagcaattattccccacagcagatcgctgcagccttgggcaaggactttccg
cctaccgaggaacaagcccatgtgatcgaaggcccctttagccccaaactcgtggttgcc
ggcgctggtgccggaaagacagaaaccatggcctcgcgcgtggtgtatctggtggccaat
ggctatgtgcgcccggagcaggttctcggcctgactttcacccgtaaggccgcgcaacag
ctggagcagcgcatccggcggcagctgattaaattgcgcgattccagcctcatcccacca
ggcggcgaggtggcagaagcgttagaaaacattgcgccgaaggtagctacctatgactcc
tatgcgggagaactcgttcgcgaatacgggctgttggttccagtggagcctacggctcgc
atcatcaccgagaccgagcgctattccttggcctacgatgtggtgcgcaattacaccggc
cagctggaagacgatcgcgccctagccacgattaccgagaccctgctgaaattcagccaa
gatatcgataatgggctcaaggacacgagtcacatcgccgagcatgcccgcgattttcgg
gcggacatcgataacctcgataaatcccaaaagaatggtcctgaatactcgcaaaagttg
ctggaatatattcagacacaggagcgccgcgtgcagtacgtgccgctgctggaggccctg
aaaaaggaacaatccgagcgacaagtcatcacctttggcgagcaaatggctgtcgctgcc
cgcgtagcgcgcgaccatcctgtggtgggcaagcaacaatcccagcgctataaggtcgtc
atgctagacgagtaccaagacacctcctatgcccagcgcgtgcttctacgaagcctgttc
ggaggggagcaaaaggaactttctgtgacggccgtgggtgatccaatgcaggccatctac
gggtggcgtggtgcgacctctgaaaacctcactgcctttgtggaggacttcccggtcgcg
ccgggcacacccgctccgaaggaccagttgaccacctcttggcgcaacccctctggtgcg
ctggacttggctaacttagtggcggagggcgtattcgaaggcgttgaacgtcccgtggac
gagctttctgccgccccgcataagggcgaaggtgacatccagttggcgtacttcgacagc
gaggttcgcgagcgtgaattcgttgccgagtacctgaaagagcagtgggaaaagcgcgag
ggagataccttcagcgcggcggttttggtgcgtaaaaataggcactccgcccccatcgct
gcggccctagacaaagcgggcgtacccaatgaaatcattggtctcggtggcctgctgtgg
cagccagaaatccaggacctcgtagctattgccaccatgctcgtgcgcccagaagacttg
cctgcggcagtgcgggtgctggcagggcccatctgtggtttgggaattagcgatattcaa
gcgcttgcttcccgccaacgaaacttggccggcgcgagggaggagcgcttgcgctgggag
ccggggatggacccagaagactacctgcgtgcgcagctggaagatgtcaccgctgaggag
ccggatcagcgcgtcggccttgccgacgccctggccgatctaggtgagagagaccgctat
accccgcaaggcctcgcccgaatggaagaggtttctgccaaactgcgacacctgcgcacc
tattctctgtccaaaccgctggtggatatcttcgccgatattgaagcattgtttaatatc
cgcaccgaagtccttgcgcgtggaagcgcagggggtgcgacacatctggataaatttgcc
gatatggtcgcgggcttccacggtgattctttgtatgcgcttttggattactttgcgtta
gcgctcgaaaaggaagatggcctagacctcggcgaggttcccgccgccactgaccgcgtg
cagattatgaccgcgcacaaggccaagggcttggaatgggaacatgtctgcgtggtgcat
gcggattcgtctagctatagtgcgaaagcagagaccttcctgaccaggatcgataaggtc
ccgggagacgatgactatattgaggtcccggaggatgcccaaaagcgctcgcatttccag
aacgcctgcgaggagtttaagaacgcagatagcgccatcaaggcggaagaatcggcgcgc
cttttttatgtggcgctgacgcgtaccgaatccaccctgaccattaccggttcgggcacc
aataacctcaatggaaagaacaagaaggctccctatgaatatctagagcgcctgaaagag
caattcccgcagtacgtggtggagtggtccgtgcccgatgagccttccgaggatgatttt
ggggagagcgcacaattcccagcacttgaggccagcccagaggcggtcgccggtgcggac
ctagtccttgcagcaatggaggaactcccagatttgagccggggtgaaacctttgagtta
tgggagcaggaagctggcgcgctcattgaggagtacaaggccctgcaacagccggtggta
gatgtagagctacccagcgagctgaccgcctctgacatggttgcgctgcgggcagacccg
ctccagtttgcccgcaggcaacgccgccccgtgccgtttaagccgaattcctatgccaag
cgcggaaccgccttccacgcgtggttggaggaccgcttcggcagcccagcgctattgggc
gaggaagaacttccgggaatcgatgaaccggaggactttgatttggaagagctcaagcag
gccttcctgaactccgagtgggccgaacgtcaaccggagcacgtggaggcgccctttgaa
attactattggtgagtccgtggtgcgcgggcgcatggatgcggtattccgcttggaggat
ggcacctggatggtggtggactggaagactggccgcccaccccagggagaagccatggat
gctgccaagatacagctagcggtgtatgcagaggcctggcgccgcatccacggcggggaa
aagattcgtgccgcattttattatgtgcacgatggatataccttcgagcctgcccgcctg
ccgcgtggggaagagctgaagaaactccttgaatcgtcagttgagcaccacaagggctaa
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