Corynebacterium tuberculostearicum: I6I74_09840
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Entry
I6I74_09840 CDS
T07593
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ctub
Corynebacterium tuberculostearicum
Pathway
ctub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I74_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctub03019
]
I6I74_09840
03009 Ribosome biogenesis [BR:
ctub03009
]
I6I74_09840
Enzymes [BR:
ctub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6I74_09840
Messenger RNA biogenesis [BR:
ctub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I74_09840
Ribosome biogenesis [BR:
ctub03009
]
Prokaryotic type
rRNA helicases
I6I74_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
UvrA_inter
PIN_9
Cj1289-like_C
AAA_22
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QQU81512
LinkDB
All DBs
Position
2068052..2069911
Genome browser
AA seq
619 aa
AA seq
DB search
MSITDNATGGVNEPEDFNKSESQDNSQGVTKDTRAANTSEDTGAESQDSANDNSQGFAHL
GLPEKILEAVAKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKTAAFALPVLSQIDTK
ARHPQALVLAPTRELALQVADSFQSFAESLKGVEVLPIYGGQAYGIQLSGLRRGAQVIVG
TPGRVIDHLEKGSLDLSQLQFLVLDEADEMLNMGFQEDVERILEDTPDRKQVALFSATMP
NAIRRLSKQYLDNPAEVTVKSERRTNDNITQRFLLIPHRAKMDAFTRILEVINYDAIIVF
CRTKHETEEVAETLRDRGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDV
ERITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEM
ELPSVDEVNEKRKEKFAQSITNSMDNKQADFFRTLVRKYSEDNNAAMDDIAAALAVMLQG
GKNFLMEDKPLPKPKRDRDRRDDRKRDFKGGSKGRGPKRPDGDFETYRLDVGKRQNVRPG
AIVGAIANEGGLSAKDFGRITIAVGHTLVDLPKNLDPAVLDRLKDTRISGQLIKIQKDTG
RPPRRDHGGGRKRGGRWRD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgtcaacgagccggaagattttaataagtcg
gaatctcaggacaactcgcaaggtgtcaccaaggacaccagggctgcgaatacttctgag
gacaccggcgctgagtcccaagattcagccaacgacaactcccaggggttcgcgcatctt
ggcctgccagagaaaattctggaggccgttgcgaaagtaggcttcaccaagccgtccccc
attcaggaagaaaccatcccgatcttgatggaaggccgcgacgttgtcggccttgcccag
accggtaccggcaagaccgcagcctttgcgctgccggttctgtcgcagattgacaccaag
gcccgccatccgcaggccctcgtgctcgctcccacccgcgagctggccctgcaggtggcg
gactccttccaatccttcgccgagtccctcaagggcgtcgaggtgctgcctatctacggt
ggccaagcctatggcattcagctttccggtctgcgccgcggtgcgcaggttatcgtgggc
accccgggtcgcgtcatcgaccacctggagaagggctcgctggacctgtcccagctgcag
tttctcgtcctcgatgaggccgatgagatgctgaacatgggcttccaagaagacgtcgag
cgcatcctggaggacaccccggaccgcaagcaggtggcgcttttctcggccaccatgccg
aacgctatccgacgcctgtctaagcagtacctcgacaaccccgccgaggtcacggtgaag
tccgagcgccgcaccaatgacaacatcacgcagcgcttcctcctcattccgcaccgcgca
aagatggatgccttcacccgcatcctcgaggtcatcaattacgacgccatcatcgtcttc
tgccgtaccaagcacgagaccgaagaggtggccgagaccctgcgtgaccgcggtttcagc
gccgccgccatcaacggcgatattgcgcaggctcagcgcgagcgcaccgtcgatcagctc
aaggatggccgcctagacatcctcgtggctaccgacgtcgccgcccgtggcctcgacgtc
gagcgcatcacgcacgtggtcaacttcgatatcccgaacgataccgagtcttacgtgcac
cgcatcggccgcaccggccgcgctggacgctccggcgaagccatcctattcgtcaccccg
cgcgagcgccgcatgctgcgctccatcgagcgcgtgaccaacgcccgcttggaagagatg
gaactgccgtccgtcgatgaggtcaatgaaaagcgcaaggaaaagttcgcgcagtccatt
accaactccatggataataagcaggcggacttcttccggaccttggtgcgcaagtactcc
gaggacaataatgcggccatggatgacatcgctgcagccctcgccgtcatgctgcagggt
ggcaagaacttcctgatggaagacaagccgcttcccaagccgaagcgcgatcgcgaccgc
cgcgatgatcgcaagcgtgatttcaagggtggcagtaagggtcgcggccccaagcggccg
gacggagactttgagacgtaccgactggacgtcggcaagcggcaaaatgtgcgaccagga
gccatcgtcggcgctattgccaacgagggtggcttgtctgccaaggacttcggccgcatc
accatcgcggtgggccacaccctggttgacctgccaaagaaccttgacccggcagtactg
gaccgactgaaggatacccgcatttccggccagctgatcaagattcaaaaggacaccggc
cgcccgccacgccgtgatcacggcggcggacgcaaacgcggtggacgctggcgcgactag
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