Corynebacterium tuberculostearicum: I6I74_10025
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Entry
I6I74_10025 CDS
T07593
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ctub
Corynebacterium tuberculostearicum
Pathway
ctub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I74_10025 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctub03021
]
I6I74_10025 (rho)
03019 Messenger RNA biogenesis [BR:
ctub03019
]
I6I74_10025 (rho)
Transcription machinery [BR:
ctub03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I6I74_10025 (rho)
Messenger RNA biogenesis [BR:
ctub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6I74_10025 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQU81547
LinkDB
All DBs
Position
2109922..2111769
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AA seq
615 aa
AA seq
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MSETDNTAAQDLASLKLPELRKMAAERGLRGVSALRKGDLITAIKTGQVPPKAKAKVEKA
AQVEKAEKAEKPEKAEKPRTKAQDEAPQKAEKQEESSEKQGNRQQGSGEEQRYESRSQAR
RARRNRARRQERQERQERQEREERNRNEEKGGAKDNRDNNSQDGSDNQGEKNDRGDNKQR
GNRHEDNNNHERGNRRGRRNRRNRRGRGNNNDNNGGNDLQVREGDELQAVGGILDVVDNN
VAFLRTTGYRAAASDVFVNNGIVRRLGLRSGDAITGQVKVSGPTHTHGNGRNRRKYNQLV
QVDTVNGIDPEGAKQRPHFNKLTPLYPNKRLRLETDPKILTTRVIDLIMPIGKGQRALIV
SPPKAGKTTILQNIANAISTNNPECYLMVVLVDERPEEVTDMQRSVNGEVIASTFDRPPS
EHTSVAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPP
KRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRGISERRVFPA
VDVNPSGTRKDELLLVPEEARIMTKLRRILSALDSHQAIDLLIKQLKKTRSNGEFLMQVA
SSAPMAADKDEEDYV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaacggacaacaccgcagcacaggatcttgcatccctgaagctgccggaattg
cgcaaaatggccgcagagcgcggcctacgtggtgtctctgccctgcgcaagggggatctc
atcaccgccatcaagaccggacaggttccgcccaaggccaaggccaaggtggaaaaggcc
gctcaggtagaaaaggcggaaaaggcagagaagcctgagaaggcggaaaagccgcgcact
aaggcgcaggatgaagcgccacagaaggcggaaaagcaggaagaatccagcgaaaagcag
ggtaaccgtcagcagggctctggtgaggagcagcgctatgagtcgcgctcccaggcccgc
cgcgctcgccgcaaccgcgcccgccgccaagagcgtcaggagcgccaggaacggcaagag
cgcgaggagcgcaaccgcaacgaggagaagggcggcgctaaagacaaccgcgacaataac
tcccaggacggctccgataaccagggcgagaagaatgaccgcggcgataataagcagcgc
ggcaatcgccacgaggacaacaataaccacgagcgcggcaaccgccgtgggcgccgcaac
cgccgcaaccgccgcggccgcggaaataacaatgacaataacggcggcaacgatttgcag
gtccgcgagggcgatgagctgcaagccgtcggcggcatcttggacgtcgtagacaataat
gtcgccttcctgcgcaccaccggttatcgcgccgcggcttccgacgtctttgtcaacaac
ggcatcgtccgccgcctgggcctgcgctctggtgacgccatcaccggccaggtcaaggtc
tccggcccgacgcacacgcacggcaatggccgcaaccgccgcaagtacaaccagctggtg
caggtcgataccgtcaacggcatcgatccggaaggcgcaaagcagcgcccgcactttaat
aagctcaccccgctgtatccgaataagcgcctgcgcttggaaacggatccgaagatcctc
accacccgcgtcattgacctcatcatgccgattggtaagggtcagcgcgcgcttatcgtc
tccccgccaaaggccggtaagacgacgattctgcagaatatcgccaacgcgatttctacc
aataacccggagtgctacctcatggtcgtcctcgtagacgagcgtcctgaggaagttacg
gacatgcagcgctccgtcaacggtgaggtaattgcctccacctttgaccgcccgccatca
gagcacacctccgtggcggagctggctatcgagcgcgccaagcgcctggtggagcagggc
aaggacgtcgttgttctgctggactccatcactcgcctaggccgcgcctataacaattcc
tccccggcttctggccgcattctctccggcggtgtggactccaatgcgctctacccgcca
aagcgcttcctgggtgccgcccgcaatatcgaagagggtggttcgctgacgattatcgcc
accgccatggtggagaccggctctaccggcgataccgtcatcttcgaggagttcaagggc
acgggcaacgccgagctgaagctggatcgtggcatctccgagcgccgcgtcttcccggcc
gtggacgtcaatccgtccggcacccgtaaggacgagctgctgctcgttccagaggaggca
cgcatcatgaccaagctgcgtcgcatcctctccgccctggattcccaccaagccattgac
ctgctcattaagcagctgaagaagacccgctccaatggcgagttcttgatgcaggtggcc
tcctcggccccgatggctgcggataaggatgaagaagattatgtctaa
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