Cyprinodon tularosa (White Sands pupfish): 119771317
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Entry
119771317 CDS
T07496
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119771317 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119771317 (cpsf4)
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119771317 (cpsf4)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119771317 (cpsf4)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119771317 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_12
zf-CCCH_RBM22
zf-CCHC
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
119771317
NCBI-ProteinID:
XP_038123119
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MQELLANVDHIKFDLEFAVEQQLGAHPLPFPGMDKSGSAVCEFFVRGACMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGTSEQPP
LPQQAQNQSKTGSTVNRSSLSLIQLTNTSPIQRQPNNINSGVQQNNMGMNRGPRPLDQVT
CYKCGEKGHYANKCNKGHLAFLSGQ
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttactggccaacgtggaccacatcaagtttgacttggagtttgctgtggag
caacagttaggggcacatccgctgcctttccctggcatggataagtctgggtcggctgtg
tgtgagttcttcgttagaggagcttgtatgaaaggtgggatgtgtcctttccgtcacatt
agcggagagaagacggtagtgtgcaaacactggctcagggggctgtgcaagaagggagac
cagtgcgagtttctccatgaatacgacatgaccaagatgcctgaatgctacttctactca
aaattcggggagtgtagcaacaaggaatgccccttcctgcacattgatccagagtcaaag
atcaaagactgtccttggtatgatcgaggattctgtaaacacggtcctgactgcagacac
agacacacaagaagagtaatctgtgtaaactacctggtgggcttctgtcctgaagggaaa
tcctgtaaattcatgcaccctcggtttgagctgccgatgggaacatctgaacagccccct
ctcccacagcaagcacagaaccagagcaagactgggtccaccgtcaatcgctcgtccctc
tctctcatccagctgaccaacaccagtcccatccagcggcagccgaataacatcaactct
ggtgttcagcagaacaacatgggcatgaacagagggcctcgccctctggaccaggtcacc
tgctacaagtgtggagagaagggccactatgccaacaaatgtaataaaggtcacctcgcc
ttcctgagcggacaatag
DBGET
integrated database retrieval system
