Cyprinodon tularosa (White Sands pupfish): 119771399
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Entry
119771399 CDS
T07496
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119771399 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119771399 (ubr5)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119771399 (ubr5)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
HECT type E3
119771399 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
119771399
NCBI-ProteinID:
XP_038123221
LinkDB
All DBs
Position
Unknown
AA seq
2855 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSYNSHPHLSLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELSKPDGSDGSKLSSGSGTGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSGGGGSGGGAGGGGAGGGSSGGGGGGSGGSGGGGGGTSGRS
STAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKSRSVIIR
ELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDA
DAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGAS
FDTERGSTSREGEPSLDKKSIPVQSPVSLGEELQWWPDKDGVKFVSIGALFSELVAVSSK
GELYQWKWSEPEPYRNAQNPSIHHPRVSFLGLANEKITLLSANSIRATVATESNKVATWV
DDTLSTVASKLEHSAQAFPELQGERMVSLHCCALYTCAQLENSLYWWGVVPFSQRKKMLE
KARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVSAGIPKVGVLLESVWN
MNDSCRFQLRSPESLKNLEKTTKTQEIKMESKPELVKTEMGPPPSPASTCSDTSSIASSA
SLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSS
SMTNQSAAPPPDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKAEI
LAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQNESNVAIFTAGQ
ESPIILRDGNGTLYPMAKDCMGGIRDPDWLDLPPINSLGMGVHSLVNLPSNSTIKKKAAI
IIMAVEKQTLMQHVLRCDYEACRQYLMNLEQAFLLDQGSQSLGALLGHRCDGNRNILHAA
VSVCFPVSNKETKEEEVFCFSEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSS
SSRGLRLREMMRRSLRAAGLGRHESGPTSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDF
ILAPAVGSLTTASSGSNQGPSTSTIPGPSTETSAVESKDRKANAHLILKLMCDSVVLRPH
LWDLLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKIAKMGDTGMGEKEDADSMFMEMI
CPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLDSLCCCTECARVCHKG
HDCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTTPNSRGEHILLF
LVQTVARQSVEHCQYRPPRIREDRNRKAPNAEDSDMPDHDLEPPRFAQLALERVLQDWNA
LKSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITFI
DTLLGTLVKELQNKYTPGRREEAVAVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIG
KCRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEP
LPPRPSPDQSSSSIQTVASYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEGV
AGEEDHHDDQEEQGEENAETEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASG
RRSVVTAATAGSEAGSRVSLAFPIFGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVEQE
TFLLDEPLERTTSASHANTAAQAPRSMQWAVRNTPSQRASGSGPSSSSTPAASSTGLIYI
DPTNLRRSSAISSSAAAAAAALEASNTSSYLTSASSLARAYSIVIRQISDLMSLIPKYNH
LVYSQYPAAVKLSYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGH
PSHPLHASQNSARRERMTAREEASLRTLEGRRRAATLLTARQGMMSARGDFLNYALSLMR
SHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQMDRKRNREILELGLD
NEDSEHENDEDTNQSSTLQDKDEDSVPTETGQNHPFFRRSDSMTFLGCIPPNPFDVPLAE
AIPLADQPHLLQPNARKEDLFGRPSQGLYSSSFMTTKGLAETSTDRNCLEILPTKMSYTA
NLKNVMSMEGGQQSSENQIMGEQEMETSKPGPSPHDLAAQLKSSLLAEIGLTESDGPPLP
SFRPQCSFMGMMISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRR
EMEKLRNLQSRDLALEVDRDRDQLIQQTMRQLNAHFGRRCTTTPMAVHRVKVTFKDEPGE
GSGVARSFYTAIALALLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSNLMQRLRNRDRER
ERRSGGLRAGSRRDRDRDSRRQLSIDTRPFRPSSEGNPSDEPDPLPAHRQALGERLYPRV
HAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLG
LPEASEKAQQQDNRKRHGSTRSVVDMELDDPDDGDDNAPLFYQPGKRGFYSPRPGKNTEA
RLNCFRNIGRILGLCLLQNELCPITLTRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIR
HSQTGEADAVFAAMDLAFAIDLCKEEGAGQVELLSGGVNMPVTPHNVYEYVRKYAEHRML
VVAEQPLHAMRKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENA
DKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPT
ANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8568 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattcacttcgttgttcacccgttgcccgggaccgaggatcagctcaatgac
aggctccgtgaagtctcggagaaactcaacaaatacagctacaacagtcatccgcatctt
agtctgctggagcaggccaccttaaagcagtgcgttgttggtcctaaccatgctggattt
ctccttgaggacggacgagtgtgcagaatcagcttcgctgttcagcccgatcgcctggag
ctcagcaaaccggatggcagcgatggttcaaagttgagcagtggttcagggacaggaagg
agctccagaccaggcaggaccagtgatccaccctggttcctgtctggttctgacacactg
ggcagactggcaggcaacacccttgggagccgctggagttccggggttaatggaggcagt
ggaggaggtggaagcggaggaggagccggaggcggcggcgcaggaggcggcagcagcggc
ggaggaggaggaggaagcggaggcagtggtggcggaggcgggggtacgtctggcaggtcg
tcaacggcggctcgcgactcccggcgccagactagagttatccgaacaggaagggaccgt
ggctctgggcttctgggtagccagccacaaccagtcataccagcatctgtcattccagag
gagctaattacgcaggcccaggtagtcctacaggggaaatccaggagtgttatcatcaga
gaactccagaggactaacctagacgtcaacctcgctgtcaacaacctgctgagccgtgat
gatgaagatggagatgacggcgatgacacggcgagcgagtcctacctcccaggagaagac
ttgatgtccctgttggatgcggacatccactcagctcatcccagcgtcattattgatgcc
gacgccatgttctctgaggacatcagctactttggctacccgtcttttcggcgctcctct
ctgtcacggctcggatcttccagagttctccttcttcccctagagcgtgactcagagctg
ttgcgcgagcgcgagtctgtattgaggttacgcgagcgccggtggctcgacggggcttcg
ttcgacacggaacgaggttcgaccagccgcgagggcgagcccagcctcgacaagaagagc
atccctgtccaaagccccgtgtctctgggggaggagctgcagtggtggcccgacaaggac
ggagtgaagtttgtgagcattggagccttgttctcagagctggtcgccgtgagttccaaa
ggagagctttatcagtggaaatggagcgagcctgaaccatacaggaacgcacagaatcct
tccattcatcaccctcgcgtttccttcctgggcttggctaatgagaagatcacattactg
tctgctaacagcatcagagccactgtagcaacagagagcaacaaggtggccacctgggtg
gatgatacgctaagcaccgtggcctctaagctggagcacagcgcccaggctttccctgag
ctgcagggggaacgcatggtgtcgctgcactgctgtgcactttacacatgtgctcagctg
gagaacagcctctactggtggggcgttgtgccttttagtcaaagaaagaagatgcttgag
aaggcaagagctaagaacaaaaagccaaagtctagtgctggcatctcctccatccccaac
atcactgtgggaacacaggtgtgtttgaggaataaccccctctaccatgccggtgcagtg
gccttttctgtcagtgccggaatccctaaagtgggcgtcttgttggagtctgtttggaac
atgaacgacagctgcaggttccagctgcgctcgccggagagcctgaaaaacttggagaag
actacaaagacccaggaaatcaagatggaaagtaagcctgagctggtgaagactgagatg
ggtcctcctccatcccctgcatccacctgtagtgatacctcttccattgctagcagtgcc
tcactgccctacaagcgcagacgttcaaccccagctccaaaagaggaagaaaaagtgaac
gaagaacagtggcctctcagggaggtggtctttgtggaagatgttaaaaatgttcctgtt
ggaaaggtgttgaaggtggacggcgcctacgtggctgtgaagtttcctggaacatcgagt
agcatgacgaaccaaagtgctgctcctcctccggactccgatccgtcctcactgttacag
gactgtaggctcctcagaatagatgagctgcaggtggtcaaaactggtgggactccaaaa
gttcccgattgcttccagcgaactcccaagaagctctgtatcccagagaaggctgaaatt
ctggctgtgaatgttgactccaaaggagtccatgcagttctaaagaccggtaactgggta
aggtactgtatctttgacctggccacaggcaaagctgagcaggagaataactttcctaca
agcaacctggcctttctggggcagaatgagagcaatgtggcgatttttactgccgggcag
gagtctcccatcatccttcgggatgggaatggcacactctaccctatggctaaagactgc
atgggtggaatccgggatcctgattggttggacctgcctcccataaacagcctggggatg
ggggttcactctctggtcaatctgccgtctaactccaccattaaaaagaaagctgctata
attattatggctgttgagaaacagacgctgatgcagcatgtcctgcgctgcgactacgag
gcttgtcggcagtacctgatgaacctggagcaggccttccttctggatcagggcagccag
agcctcggagcacttctgggtcatcgatgtgacggaaaccgtaacatcctccatgctgct
gtttccgtctgcttccccgttagcaacaaagagaccaaagaggaggaagttttttgcttt
tcagaagctgaaaggtcagagcgaaacacgtttgcagagcgtctttctgctgtagaagca
atcgccaacgccatttctgtggtgtccagcaacagctctggaaaccggaccggctcctcc
agtagcagagggcttcgattaagggagatgatgcggaggtctctcagagcggccggtctg
ggccgccatgaatctggtccaacatccagtgaccatcaggatcctgtctccccacccatt
gccccgcccagttgggtcccagaccctccaccaatggaccctgatggtgacattgatttc
atcctagcaccagcagttggttcactcaccacagcatcctctggttctaaccagggcccc
agcacttccaccataccagggccgtcaaccgagacatctgcagtggagtctaaggacagg
aaggccaatgctcaccttattctaaagctgatgtgtgatagtgttgttctcaggccacac
ctatgggacctcctctctgcaaaggatgccagaggaatgacacctttcatgctggctgtc
agcggaagagcctaccctgctgccattactgtgctggaagcagctcagaaaatagccaag
atgggtgacacaggcatgggggagaaagaggacgcagattctatgttcatggaaatgatt
tgcccgtctggaaccaacccagatgattctccactctatgtcctctgctgcaatgacacc
tgcagtttcacctggactggagctgagcacattaaccaggacatatttgagtgtcgaact
tgtggcctacttgattcgctctgctgctgcaccgagtgtgcaagggtgtgccacaaagga
cacgactgcaagttgaaaaggacttctcctacagcttactgtgattgctgggagaaatgc
aaatgcaaaacactaatagctggccagaaggctgctcgccttgatttgctttacagactt
ctaacaacaacaaacctggtcactacaccaaacagcagaggcgagcatatattactgttc
ctggttcaaactgttgccaggcagagtgtcgagcactgtcagtacaggccaccgcgcatc
agagaagacaggaaccgtaaagctccaaatgcagaagactctgatatgccagaccatgac
ctggaacctccccgctttgctcagctggctctggagagggtcctacaggactggaatgcc
ctcaaatctatgattatgttcggttctcaggaaaacaaagaccctctcagtgccagcagc
agaatcgcccacctcctgcctgaagaacaggtgtacttgaaccagcagagtggcaccatc
cgcctcgactgtttcacccactgcctcattgtgaagtgtgctcctgacatcaccttcata
gacacgctactgggaactctggtgaaggagctgcagaacaagtatacaccgggcaggaga
gaggaggcggtagctgttactagaaggtttctgcgctctgttgctcgggtgtttgtcatc
ctcagcgtagagatggcttcctcgaaaaagaaaaacaacttcatcccgcagcccatcggg
aaatgccggcgtgttttccaggctctgcttccctatgctgtggaggagctgtgcaacgtc
gcagagtcgctgatcgtcccggtgaggatggggatagccaggcctacggctccttttact
ctggccagcaccagcatagatgcagtacagggcagcgaggagcttttctccgtggagccg
cttcctccgagaccttcgccggaccaatccagcagctccatccaaacagttgcttcttat
atcattaggaaccctcagcccagacggagcagccagtctcagcccgtcagaggaagagac
gaggagcaggatgacatcgtgtcagcagatgtagaagaggttgaagttgtggaaggagtt
gctggggaggaagaccatcatgatgaccaggaggagcagggtgaggaaaatgctgaaact
gaaggtcagcatgatgagcatgatgaagatggaagcgacatggagctggacctgctggca
gccgctgagacggagagcgacagcgaaagtaaccacagcaatcaggacaacgccagcggc
cgcaggagcgtcgtcacggcagcgactgccggctctgaagcaggcagtagggtctccttg
gcctttcctatttttggtgccagcagtgtccctgccttcttttcagaggacgactcccaa
tccaacgactccagtgactcggacagcagcagcagccagagtgacgacgtcgagcaggag
actttcctcttggacgagccgctggagaggacgacgagcgcctcgcacgccaacacggca
gcccaggctcctcgctccatgcagtgggctgttaggaacactccaagccaaagagccagc
ggaagcggcccttcaagctcctcaacaccagctgcgagctcaaccggcttgatttacatc
gaccctacaaacctgcggcgctccagcgccatcagctccagcgccgcagcggccgccgca
gcactcgaagccagcaacaccagtagctacctgacgtcagccagcagcctggcccgagcc
tacagcatcgtcatcaggcagatatcagacctgatgagtctgattccgaagtataatcac
ctcgtctactcgcagtatcccgctgccgtcaaactctcctaccaagacgcagtcaacctg
cagaattacgttgaagagaagctgatccccacttggaactggatggtttccatcatggat
tccaccgaggctcagctgcggtacggctcggctctgtcgtctgccggagaccccggccac
cccagtcaccctctgcatgcctcacagaactccgctcgccgcgaacgcatgaccgcccgg
gaggaggccagcctccgtactctggaaggacggaggagagcagcaacactgctgaccgct
cgtcagggcatgatgtccgcccggggagacttcctgaactacgccttgtctcttatgcgc
tcgcacaatgacgagcactctgatgtgcttcctgttctggatgtttgctcgctgaaacat
gtggcctacgtgtttcaggctctgatttactggataaaggccatgaatcagcagaccacc
ttggacactccgcagatggacaggaaaaggaatcgagagattctggagctcggtttggac
aacgaggattctgagcatgagaacgacgaggacaccaatcagagttcgactctgcaggac
aaggatgaggattcggttcctacggaaacgggtcagaatcaccccttcttccgccgctct
gactccatgaccttcttgggatgcatcccacccaaccccttcgacgtccctctagcggag
gccatccctttggccgaccagccccaccttctgcagccaaatgcaagaaaggaggatctc
tttgggcgtccctctcagggcttgtactcttcgtctttcatgacaaccaaaggcctggct
gagacgagcacggataggaactgcttggagatcctgccaactaagatgtcgtacaccgcc
aacctaaagaacgtcatgagtatggaaggaggccagcagagctctgagaaccagatcatg
ggggagcaggagatggaaacctccaaaccaggcccttcaccacatgacctggctgcccag
ctgaagagcagcctgctggctgagatcggcctcacagagagcgacggtcctcctcttcca
tccttcagacctcagtgcagttttatggggatgatgatttcacacgacatgctgctcggc
cgctggcgcctctcacttgagctctttggtcgtgtcttcatggaggatgtaggagctgag
cctggatcgattctcacagagcttggcggcttcgaggtcaaggaatccaagttcagacgg
gagatggagaagctgagaaaccttcagtctcgagacctggccctggaggtggaccgtgac
agagaccagctaatacagcagaccatgcgtcagctgaacgcccacttcggcaggcggtgc
acgaccacacccatggctgtgcaccgagtgaaggtcaccttcaaagacgagccaggagag
ggcagcggcgtggctcgcagcttctacacggccatcgctctggccctgctctccaacgat
aagctgcccaacctggactgcgttcagagtgtcagcaagggcatgcaggccagcagtacg
tgtcatcacgattacaattcaaatctgatgcaacgtttgagaaacagagacagagaaagg
gagcggagaagtggaggacttcgagcgggatctcggagagaccgagacagggattctaga
aggcagctctctatagataccaggccattcaggccttcctctgagggtaaccccagcgac
gagcccgaccctctgcctgcacacagacaggctcttggagagcgcctttacccacgagtt
catgcaatgcagccggcatttgccagtaaaatcacggggatgttgctggagctgtctcct
gctcagctgctgctgctcctggccagcgaggattccctgcgagccagggtggaggaagcc
atggagcttctcatcgcacacggaagggaaaatggagcagacagcatcctggatctgggt
ctccctgaagcttctgaaaaggcacagcagcaggataaccgtaagcggcatggttcaaca
cgcagcgtcgtcgacatggagttggacgacccagacgacggcgatgacaacgctcctctt
ttctaccaacccggcaagcgaggcttctactcccctcgaccgggtaaaaacacagaagcc
aggctgaactgtttcaggaatatcgggagaatattggggctctgcttgctgcagaacgaa
ctctgtccgatcacactgacgagacacgtcatcaaagtgttgcttggcagaaaggtgaac
tggcatgactttgccttctttgacccggtcatgtacgagagcttgaggcagctgatccgc
cactcgcagacgggtgaagcagacgccgtgtttgccgccatggatctggccttcgctatt
gacctgtgcaaggaggaaggagctggacaggtcgagcttctgtctggtggcgtcaacatg
ccagtgactccgcacaacgtctacgagtatgtgaggaaatacgcggagcaccggatgctg
gtggtggctgagcagcctctccatgcgatgagaaaaggcttgctggatgttcttcctaaa
aacgccctggaggacctgacggccgaagacttcaggctgctggttaacggctgtggagaa
gtcaacgttcagatgctgatcagcttcacttctttcaacgatgaatcaggggaaaacgca
gataaacttctccagtttaaacgatggttttggtccatagtagaaaagatgagcatgacc
gagaggcaggatctggtgtacttctggacgtccagcccctctctgcctgccagcgaagag
ggcttccagccaatgccctccatcaccatcaggcctccagatgaccagcacctccccaca
gccaatacctgcatctcgcgtctctacgtgccactctactcctcaaaacagatccttaaa
cagaaactcctgctagccattaagaccaagaactttggttttgtgtag
DBGET
integrated database retrieval system
