Cyprinodon tularosa (White Sands pupfish): 119771419
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Entry
119771419 CDS
T07496
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119771419 (rttn)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119771419 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
IcmW
Motif
Other DBs
NCBI-GeneID:
119771419
NCBI-ProteinID:
XP_038123276
LinkDB
All DBs
Position
Unknown
AA seq
2254 aa
AA seq
DB search
MDMLSPLIKKMGHSLVEIRVRALKSILSKLKHSLITVTDIVQEKMLFVYLLEWFNFPEVP
MKEDVLGLLLTLSKHPSSAQMLRDVGAVDFLSQLSSTVEPRLRAVIDGTLDQLFQLHELL
PSHSAVYSHGSCSTTTTASTIVSGDNKLPKIGYFHNRMQSNSNVPPQKIAVRESVRCLKF
SVFPWLTLTNTDRHILSSNESSLGSSDPNMVRTTCELLCDVILQDFPAEIFLQRPGIVKN
LLLLLRLGSGKGEVGYLRSSALSCLRQLCVGLQRRLRFHQDPGFYSAKQDPLSQNSSFSY
AQEVRGNRRSQASSPAAELSPRPSVVGRSSQRARGDGQDGDAASNSSSHRGGATVQGPEQ
TPRSPADAAQLQLPDLSMEDVLELQLQQLNLAQFSVATMQHAIPLLKTDGLHVFHRVLEL
LCDALLLLRDSVCELVWDDRSLVGMELKEKLQACMEQLGDILYLHQNHSADDPDSSQVYH
RMAYIGTAIFTIKLLQTILPPEKASENLPENTATALFHLSVDSSLGSLFPSMQETAVAYL
EQVNSDGHSLYRRMNRAALWMESTCNFIKEAQADGEKNWLDLLELADQTIDGLPFHQHLP
IIKECVHMCSHLWKFDQPSPLLQSESQKLFLKLLSHPSPPVKTETYECALNLVKDCLGIQ
NLLRQEAAACEGVNFLLHRRVLYEMSAFGLQDSAERVNIAAKDILLFLLKGRLMMTAPAW
DRFNEALYPVIPILQGYASTEESLGKAVLLISDMSDVTRDNVFPTTGKLKAALRLLFSKQ
PTVRIAAVQHILPHLTSSAEDNPTRPDADQSLMTSLPNLFCLRNPVDVTLDTSYKSILKV
EAVEKLFCILSSDTVDLSIRRSAAEQLSVVLQDTVVHSVLKNLGIAEKVISFITDSVNGN
KSFDLLLEPCACILRKLVYADSSLRHSLAQNNLLLLTLLRASLILKEIKGNGTETAVLMC
LLLFDEIASIETWSEKSTKDASLSPFSLPVAAVRRYNIPFQAATHHAVSPYCCILAPSSD
LLTLSSIRQALQVAWNAAWHSGIDNVLEKVHSVAGDSQFHPDLKLSESQISSLRAMHLPA
ALHDCIQAIVTAEGHKSVASALSRLNLYLLFSSLALPHVPTHSCRDILQSLSWQTVLTRF
LQVRPACVEDERLLVGIVTFLNAYFKQIPTERTSDQEDRDLRWILELLLNQETAALLHLL
HGAETQSLDDPEEVTKHVSQRLQRELTNFFNTLMIRLSNTTDRLCLALVGPFKSQLALRL
LQSLRLSDAPRFYGLPSLERALQGMVRLTAQPGWSSHCPDLEPSSLCSKYLSGLLEVISS
FYVEWRGNSLSFMGKGVTRNAIICLLHLSHEMMTENKDKDFITQWSFGNDGTAEEVSGSQ
LGLAWLVPLWVDRDQEVRFASLSLGAALSSMPSGCQALSASCQNISGGLWGTLLNILLDQ
QESSMVRREAAFILQNLLVMPMPANGEEAKDSHWQQPCVHDEVSGVSLVGLPALQALLYH
CQFFHNVALSASTCYRGRYTFNMQPQPLESHNPSLQESSFSDSDNSLLLLRCEPEPSITS
GRSSSSISTSSTAVSNTASKGSRLNSPKVSSPVSIPDVTPARLMAQGQSDRDTSNSTPSQ
DSQQDEPSGAEAVVVVTPDLLTAQCGLLNNLLAILPDFTLTAIQQNQLLQVLSSLVDIEL
MEKCLTELKTPSILPGTREDIKRQFVTALQFLSSFSKLLRSCVTESKELNGQTDFLRRLS
SNLVAVLMLDMKSLVIKLSVTHCFPSSDPGTWDVVCVCWTDVFMLLATLVKRDSSAVHPS
VSAALGRRWRTFTGTLSQCLNEKNAGVLLHTVALQFLSTVFTEETELRGTELRSSTSKHS
STLSNVLNGPAASELCELLLQSFEKRTLQDPLKRLTARALMTLLACSPTAQNYAAKAGLI
DSSVELLKQIHSHLHLKSIRPGKASHSKKEVGYLKEVKLTAEILRSALYCNNECKVAAMD
ARLTPTLYALWPWLLLDDPTMEAVLELLCVYTANCHPACSSLCGSSLSGAPGSKGSSNTS
LMNSVMKLTSLAPDNSPIQNLCFSLVTNLAVSRECRCALQKNNFLQSFLLVPSHKAGAKA
TSVGGGGNLLNQWLRLLVSLSSTEDGQQSILKVTGILELLAELAPHRQHALLTLHNLCFS
PANKSHIMANDKAMKVLLSCLNSKELETCCIGASALWALLHNNQRAKAALKCPSVRLKIQ
EALSIFKQDAEKKQEPLGSHLQKCLDHISQLLNS
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atggacatgttatccccgcttataaagaaaatgggccactcgttagtggaaataagagtt
cgagcgttgaagagcattttaagtaaactgaagcattccctcatcactgtgactgacatt
gttcaggaaaagatgctgtttgtttatctgcttgaatggttcaatttcccggaggtgcca
atgaaggaggacgttcttgggttgcttttaactttatcaaagcatccgagttcagcccag
atgctgagggatgtcggggcggtggactttctctctcagctttcttctacagtcgagccc
agactgcgagctgtcattgatggaaccctggaccagctgttccagcttcatgagctactc
cccagtcattcagctgtctactctcatggatcatgcagcacaactacaacagcctcaact
attgtttcaggtgacaataaattgcctaaaatcggttatttccacaacaggatgcagtca
aactcaaatgtaccacctcagaagatagcagtacgtgaatctgtgagatgtttgaaattt
tcagtttttccctggctgactttaacaaacacggaccgacatatactttcttccaatgag
agttctctgggaagcagcgatcctaacatggtgcggacaacctgtgaactcctttgtgat
gttatcctgcaggactttccagcagaaatcttcctgcaaaggcctggaattgttaagaac
cttttactgctgctcaggctgggttcaggtaaaggagaggtcggctacctccgctcatct
gccctgtcctgcctgcggcagctttgcgtgggactgcagaggaggctgcgctttcatcag
gatccaggtttctactcagcaaagcaggatccgctgtcgcagaactcgtcgttctcttac
gcccaggaggttcgggggaaccggcgttcacaggcctcctctcctgcggctgagctctct
cctcggccctcagtggtggggcgttcatcccaacgagcccggggagacggtcaggacgga
gatgcagcctctaacagcagctcgcacagaggtggggcaacagtccagggccccgaacag
acgccccgctcccctgctgatgcggctcagctgcagcttccggacctgagcatggaagat
gtactggagcttcagttacagcagctcaacttggcccagttttctgttgccaccatgcag
catgccataccactgctgaagacagacggtttgcatgtgttccaccgtgttctggagctg
ttgtgtgatgctctcctcctgctcagggatagtgtttgcgagctggtctgggacgatcgc
agcctggtggggatggagctgaaggagaagctgcaagcctgtatggagcaacttggggat
atactctatttacatcaaaaccattcagccgatgatcctgacagttcccaggtttaccac
agaatggcctatatagggactgccatattcaccattaaactcctacagaccatcctccct
cctgagaaggccagtgaaaatctcccggaaaacacagcaacggcacttttccacttaagc
gtggactcatcactgggaagtttatttcccagcatgcaggagacggctgtggcctacttg
gagcaagtaaactcagacggccacagcctctacaggaggatgaacagagctgcgctttgg
atggagtccacttgtaacttcataaaggaagcacaagctgatggggagaagaactggttg
gaccttctggaacttgcagaccaaaccatagatgggcttccttttcatcagcacctaccc
atcatcaaggaatgtgttcacatgtgctctcacttgtggaagtttgatcagcccagcccc
ctcctccaatccgagagccagaaactcttcctcaagctgctgtcgcatccctcaccgcct
gtcaaaacggaaacatatgagtgtgctttaaacctggtcaaggactgtcttggcatccag
aatctgttgagacaggaagcagcagcatgcgagggtgttaacttccttctccaccgcagg
gtcctgtatgaaatgagtgcttttggactgcaagactctgcagaaagggtgaatattgct
gccaaggatatcctgctcttcctcctcaagggacgattaatgatgacagcgccagcctgg
gacagattcaatgaggcactttacccggtcatacccatattacagggctatgccagcact
gaggagtcacttggaaaggctgtcctgctgataagtgacatgtcggatgtgacaagagac
aacgtgttcccgactacaggcaagctgaaagcggcgctccgtctcctcttctctaaacag
cccactgtcagaatagctgcagtgcaacacatcctgccccacctcaccagcagtgctgag
gacaaccccactagaccagacgcagatcaatctctgatgacgtcccttcccaacctcttc
tgcctcagaaaccctgtagacgtcacactggacaccagctataagtccatcctaaaggtg
gaggcagtggagaagctgttttgcatcctgagctcagacactgtagacctctctatcaga
agatcagcagcagagcaactttctgtggttctgcaagacacagtagttcactccgtactg
aagaacctaggcatcgcagagaaagttatttctttcatcacagacagtgtaaatggcaac
aagagctttgatcttcttctggagccgtgtgcatgcatcttgagaaagctggtgtacgct
gattcgtctctgaggcacagcctggcgcaaaacaacctcctgctcctcacacttctcagg
gcatcgttgattttgaaggaaataaaaggcaatggaaccgaaacggccgtcctaatgtgt
ttgctgctttttgatgagatcgccagcatcgagacctggtcagagaaatccaccaaagat
gcatctctctcaccattttctctaccggttgcagcagttaggagatacaacattcccttc
caagcagcgactcatcacgccgtcagcccgtactgctgcatcttggctccttcttctgac
cttctcaccctaagctccatccgccaagccttgcaggtggcctggaatgctgcatggcat
tctgggatagataatgtcctggagaaagtgcacagtgttgctggtgattctcaatttcac
cctgacttgaagctgtcggagtcacagatctcgtcgctcagggcaatgcacctcccagct
gcgctgcatgactgcatccaagccatcgtgacggcagagggacacaaatctgtggcctct
gctctgtccaggctcaacctctacttgttgttcagcagtctggctctacctcatgttccc
acccacagctgcagagacatccttcagtccctcagttggcagacagtgttgaccaggttt
ctccaggtgcgtccagcctgtgttgaggatgaaaggttgctggtgggaattgtgacattt
ttgaatgcctacttcaaacaaattcccacagagcgtacctctgaccaggaggaccgcgac
ctgcgctggatactggagctgcttctcaaccaggagactgctgctcttcttcatttgctc
catggtgcggagacacagagcttagacgatcctgaggaggtaacgaaacatgtcagccag
agactgcagagagagctcaccaacttctttaacaccctaatgatcagactgtcaaatacg
actgacaggctatgtttggcattagtgggtccctttaagagccagctggcactgcgcttg
cttcagagcttgcggttgtctgatgccccgcgtttttatggccttcccagcctggagagg
gcactgcagggcatggtcagactcactgcccagcctggctggagctcccactgccctgac
ctggagcccagctccctctgctccaaatatctcagcggattattagaggtgatctcttcc
ttttacgttgagtggagagggaactccctgtccttcatggggaaaggtgtgaccaggaac
gccattatttgcttgcttcacttgtcccatgagatgatgacggagaacaaggataaggac
ttcataactcagtggtcattcgggaacgatggaaccgcagaggaagtcagtggctctcag
ctgggtttggcttggcttgtcccgctttgggtggaccgagatcaagaggtgaggtttgcc
agtttgagtttaggcgctgctctctcctccatgcccagtggctgccaggctctgtctgcc
agctgtcagaacatcagcggaggtctgtggggcacgctgcttaacatccttttggaccaa
caagagagcagcatggttcgcagagaggctgcgtttatcttgcagaacttgctggtgatg
cctatgcctgccaacggagaggaggccaaggactcccactggcagcagccctgtgtccat
gatgaggtatccggtgtgtctttggtgggtcttccagcactgcaggctctgctgtaccac
tgtcagtttttccacaatgtggctctctctgcctcaacttgctaccgtggcaggtacaca
ttcaacatgcagccacagcctttggagagccataatccgagtcttcaggaaagctctttt
tctgattcagataattctctactgcttttgagatgtgagccagaacctagcatcacctct
ggaagaagttccagctccatttccacttcaagcactgcagtcagcaacacagcaagtaaa
ggttcacggctaaactctcctaaagtttcctccccggtgagcatcccagatgtaactcct
gccagactgatggctcaaggtcagagtgacagagacacaagcaactctactccctctcag
gactcccaacaagacgagccctcaggcgcggaagctgttgtcgtggtaactcctgacctc
ctgacggcccagtgtggcctgctgaacaatctgttggccatactaccagatttcaccctc
actgccatccaacaaaaccagctactgcaggttctgagcagtttagtagatatcgagctc
atggaaaaatgtctgactgagctgaagacacccagcatccttcctggaaccagagaagac
atcaagcgtcagtttgtcactgcacttcagttcctatcaagcttttccaaactgctgcga
tcttgtgtcacggagagcaaagagctgaatggccagacggacttcctgaggaggctgtcg
tctaatcttgtggctgttctcatgctggacatgaaatcattagtaataaaattgtcggtg
actcactgtttcccctcctcagacccaggtacgtgggatgtggtttgcgtttgctggacg
gatgtgtttatgcttctggccactctggtgaagagagacagctcggcagttcacccatct
gtctctgctgcgctgggcagacgctggcggacattcacaggaacgttgtcgcagtgtctg
aatgagaaaaatgcaggtgtcctgctccacactgtggctctgcagttcctctccacagtt
ttcacagaggagactgagttgcgcggcacagagctcagaagctcaacatctaagcacagc
agcaccttgtcaaatgtcttaaacggtcctgctgccagcgagctctgtgaattgttattg
cagagctttgagaaaaggacccttcaagaccctttgaagaggctcacagctagggctctg
atgacgcttctagcctgcagtcccacggctcaaaactacgctgccaaagccggtttaatt
gacagcagtgtggagctgctgaagcagatccactcccacctccacctgaagtccatccga
cctggaaaagcttctcacagcaaaaaggaagtgggctatttaaaagaagtcaagctgact
gcagagatcctgcggagtgctctttattgcaacaatgaatgcaaagtggctgctatggat
gcccgtttaacgccaacactctatgctctatggccttggctcttattggacgaccccaca
atggaagcggtgctggagctcctatgtgtctacacagcaaattgccacccagcatgcagc
tccttgtgtggcagtagcctcagtggggcgccaggatctaaaggctcctccaacacctct
ctgatgaattcagtgatgaagctgacctctctcgccccagacaacagccccatccagaat
ctatgcttctctctagttactaacctggctgtgtcacgggaatgtaggtgcgccctgcaa
aagaataatttccttcagagcttcctgttagtgccttcccataaggctggtgccaaggcc
acatcggtcggtggcggtggaaacctcctgaaccagtggctgaggctcctggtcagcctg
tcctccacagaggatgggcagcagagtattctgaaagtaaccggaatcctggaactgcta
gcagaattggcaccgcaccgacagcatgcgctgctcacccttcacaacctctgcttcagc
cctgccaacaaatcacacatcatggccaatgataaagccatgaaagttttattgtcttgt
ttgaacagtaaagagttagaaacctgctgtataggagcttctgcactgtgggctttactg
cacaacaatcagagggcgaaggctgccctgaaatgtccatccgttcgattaaaaatccag
gaggccctctccatcttcaagcaagatgcagagaagaagcaggaacctttgggttcccac
ctgcagaagtgcctggatcatatttcacagttgctaaacagttga
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integrated database retrieval system
