Cyprinodon tularosa (White Sands pupfish): 119771429
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Entry
119771429 CDS
T07496
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119771429 (ubr1)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119771429 (ubr1)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
119771429 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
IL32
Motif
Other DBs
NCBI-GeneID:
119771429
NCBI-ProteinID:
XP_038123292
LinkDB
All DBs
Position
Unknown
AA seq
1772 aa
AA seq
DB search
MADTEKPSDGLQLSQEWLEAADYRAELLQHLKDQVPQIFCLKKDLSPQEEEELMQRRLLH
PLECFLFGEDPQDGLEKLKQGSTSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKSHRYKMHASSGGGFCDCGDVEAWKIGPCCSKHDPGSAAAMVTDESVLEPELYERAEK
LFRVLLRYVTDFLVWEENFELSAELQPRIKDNAYYCVLYNDEHHSYDQVIYTLQRSVNCD
QIEAQTHTTLIDKEGRRAVKRGTLRSCQQAKDLIRVNFVFSFLILVDISDNLQSEKSCNP
FCAALQSSSEHISLQPLRVEILHATVMAHQTFALRLGNWFQKVIGYSVGFRLAFCQVALE
PNADTDRPCLISRLMLHDAQMYKGARKIVHELIFCSMLMDSEFKRLFAVEFTKYYKQLQK
DFISDDHERSISITALSVQIFTVPTLARQLIEECNVIKVIVDTVLELLREHLDDNNRFFF
LGYNSDKFTRIQVIFHDLRYILISKPSVWTEEMRGQFLAGFRIFLGFLKCMQGMEEVKRQ
LGQHIAVEPEWEAGFTLQIQLRHILAMFQDWCSSDEEIMLQAFKDCHAALIECNNQPFHK
EPKDFYMCKHILRARPYKVSQEPVSIHLPISRLLAGLYVVMWKTGAIERLDNPERYDFVE
LAELPLRCVVLAAQVTAEMWRRNGLSLVSQVYYYQDVKCRDEMYDKDIIMLQISASKMDP
NHFLMLILLRFELFEYFNGCRVSKDQDELTQWNRLTEEMLFLLIAIFGERYVPGISQVTR
EEVTMREVIHLLCIEPMAHSTLVKSLPENENHETGLEGVIAKVATFRKPGVSGHGLYELK
KERLIDFNPFFYHYSRSQRSKAEESQKKRRSQEGNDKALRPPVPPAFSPSFSRIVNLLCC
DVIIHILRHILQRPVDDRSTHWTEAMIQRALHLIGQALVEEKIQLENSSVEEVTFDFSLK
ARAVGSENGKSLFLLLSKIKSLPSLEAQKDLIKWLLQMFEIVKCLREKSSPSVSVCMDTT
RPEESIQDKEKAERKRKAEAAKLHRQKIMAQMSAMQKNFIESNKMLYDNMPDTGTQGEPV
RPSESSAMEQKELCIAFGPLRGPSPAEREVLTCILCQEEQEVLPLAPAMVLTACVQRSTV
LTQCRGRIPANAADGTGTYPLFMPPDLAVGTHTGSCGHVMHATCWQKYFEAVQNTTRNRL
HAELIVDLENGEYLCPLCKSLCNTVVPLIPLEPLTFNYENAEIIGQHLTLPRWIQVLAAR
IKGLKSVMQDNEFNPDGGSSSSGTTGLFGDGQPDFRSILAYGVQEPRKFSDGIAEMLVVC
ATTVHRVGLKTAPNELCPRVPLMAWNTCAFTIQAIENILQEEDKPLFGSLQNRQIAGLKA
IVQFAASQRLKSSQGVIQRHFADMIGVLLPVLSRKNTPSILDVDFFHLLVGLVLSMPSLY
QEEGIDLQPSAVSSAFNNMYIFHLVTMAHILQVLLTSSDFPAAGDGEESEEARSAADLYT
AVSQHTGRLVPDLSGGSVAQRIKAGIEPFLRCAALFFNCLTGVHTPEELLNASVTSPGQV
EAMCGYLALPLNIFQLFQDYRDVVSPLLQRWCGSPSITKALQGKTQTVRYPRIRNRLIEL
PEDYSSLLNKASHFQCPKSTIDERKHPTLCLVCGAMLCSQSSCCLSQLDGEDVGACTAHA
AMCGAGVGMFLRIRECEIVLMASRTRGSTYPAPYLDDYGETDPHLGRGNPLHLCTERYRK
LNQLWQQHCILEEIARSLEVVNVMFAFEWQLV
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacggagaagccgtcagatgggcttcagctcagtcaggaatggctggaggcg
gcagactacagggcggagctgctccagcacctgaaggaccaggtgccccagatcttctgc
ctgaagaaggacctcagccctcaggaagaagaggagctcatgcagaggcgactcctccac
cctctggagtgctttctgttcggagaggatcctcaagatggtctggagaagctcaagcaa
ggcagcacctcctctcagctctgtggccgtgtgtttaaggagggagagactgtttactcc
tgcagggactgcgcaatcgatcccacctgcgtgctttgcatggactgcttccaagacagc
gtgcacaaaagccatcgttacaagatgcacgcgtcatcaggtggggggttctgtgactgt
ggcgatgtggaagcctggaagattggcccgtgttgctccaaacacgacccggggtctgcc
gctgctatggtaacggacgaatccgttttggagccagagttgtacgagcgtgctgagaaa
ttgtttcgggtccttctgcgctacgtcaccgacttcctggtgtgggaggaaaactttgag
ctctcagctgaactccagccccggattaaagacaacgcatactactgtgtgctttacaac
gatgagcatcactcctacgaccaggtgatctacaccctgcagcgatcggttaactgtgat
cagattgaagctcaaacacacacaactctcatcgacaaagagggccggcgggctgtgaag
agaggaacactccgctcctgccagcaagcaaaagaccttattagggtaaactttgtcttc
tcattcctgatattagttgatatttctgataatttacaaagtgagaagagttgcaaccct
ttctgtgctgcattgcagtccagctccgagcacatctccctgcagcctctacgtgtggag
atccttcatgcaacagtgatggctcatcagacttttgccctccgcctcggcaactggttc
cagaaggtcattggttactcagtgggcttcagactggcattctgccaggtggcattagag
ccaaacgcagacacagatcgcccttgtcttatcagcagacttatgctgcacgatgcacag
atgtacaaaggagctcgtaagatagtacatgagctgattttctgtagcatgctgatggat
tctgaattcaagaggctttttgcagtcgagtttacaaagtactacaaacagctgcagaag
gacttcatcagtgacgatcatgaaaggagtatatccatcactgctctgtctgttcagatc
ttcaccgttcccacattagccagacagctcattgaagaatgcaatgtcattaaagtgatc
gttgacacagtcctggagctgctgcgggaacatttggatgacaacaaccgctttttcttc
ctgggctacaattcagacaagtttactcggatccaggtcatcttccatgacctcaggtac
attctgattagtaagccgtctgtgtggacagaggaaatgcgaggacagttcctggcagga
ttcaggatctttctgggctttcttaaatgcatgcagggtatggaggaagtgaagcggcag
ctcgggcaacatatcgcggtggagccagaatgggaggctggtttcacactccagatccag
ctccgtcacattcttgccatgtttcaggactggtgctcttctgatgaggagatcatgctg
caggcgtttaaggattgccacgctgccctgatcgaatgcaacaaccagcccttccataag
gagcccaaggacttctacatgtgcaagcacatcctgcgggctcgtccatacaaagtgtct
caggagccggtcagcatacacctgcccatttccaggctgctagcaggtctgtatgtagtt
atgtggaaaaccggcgcaattgaacgtttggataatccggaacgctatgattttgttgag
ctcgcagagcttcctctgcgctgcgtggtcctcgccgctcaggtcacagctgaaatgtgg
cggagaaacggcttgtcgttggttagccaagtctactactatcaagatgtaaaatgcaga
gacgagatgtacgataaagatatcatcatgcttcagatttctgcttccaaaatggatccc
aaccacttccttatgctgatattgctcagatttgagctttttgaatactttaatggatgt
cgtgtgagcaaagaccaggatgagttgacgcagtggaaccgtttgaccgaggagatgctc
ttcctgctgatcgccatctttggcgagcgttatgttcctgggatcagtcaggtcaccaga
gaggaagtgacgatgagggaggttatccacctgctgtgcattgaacccatggctcacagc
actttggtgaaaagcctaccagagaatgaaaatcatgaaacaggcctggagggagtgatt
gcaaaagttgctactttcaggaagccaggcgtgtcagggcatggattatatgaattaaaa
aaggaacggttgatagactttaaccctttcttttaccactactcgagatctcagcgcagc
aaggcagaagagtctcaaaagaagagaagatctcaagaaggcaatgataaagctttgcgt
cctccggtgccaccagccttttctccaagtttctcaaggattgtgaaccttctctgctgt
gatgttatcatccacatcctgagacacattctgcagagacccgtggatgaccggtcaacg
cactggaccgaagccatgatccagagggccctgcatttgattggtcaagcattggtggaa
gagaagatccaactggagaacagcagtgtggaggaagtgacctttgactttagcctaaaa
gctcgtgcagttggctcagaaaatggcaagtcactcttcctcttgctgtccaagattaag
tctctgccttcccttgaagctcagaaagacttgatcaaatggcttctgcagatgtttgag
attgtgaagtgcctcagagaaaagtccagtccttcagtttctgtgtgcatggacacaacc
aggccagaagagagcatccaggacaaagaaaaagctgagcggaaacgaaaggcagaggca
gctaagctccaccgacaaaagatcatggcccagatgtcggcaatgcagaaaaacttcatt
gaatcaaataagatgctgtatgacaacatgcctgacactggaacacagggtgagcctgtg
aggccttctgaaagctctgccatggagcagaaagagctctgcatagccttcggacctctc
agaggaccctccccggctgagagggaggtgctcacctgcatactttgtcaggaggagcag
gaggtgctgcctctggccccagccatggtgctgacagcctgtgtccagcgttccaccgta
ttgacccagtgcagaggaagaattccagctaacgcagctgatggaacggggacttatccc
ctcttcatgccccctgacctcgcggtggggacccacactggcagctgtggacacgtcatg
catgctacatgttggcagaaatattttgaagcagttcagaacactaccagaaacagactc
cacgctgagctcatcgtcgacctggagaacggagagtacctgtgtcctttgtgcaagtct
ctatgcaacacagtggtccctctcatccccttagagccacttacattcaactatgaaaat
gcagaaataataggacagcatttgacattgccccggtggattcaggtcctcgccgccagg
attaaaggactgaagtctgtcatgcaggacaatgaatttaatccagatggtggaagcagc
agtagcggcacaactgggctgtttggtgacggacaaccagactttaggtccattctagcc
tatggagtacaagaaccgagaaagttttctgacggaatcgcagaaatgctggtggtgtgt
gccactacagtccacagagtgggactaaagactgcccccaatgagctctgcccccgggtg
cccctcatggcctggaacacatgtgccttcactatccaggcaatagaaaacatactgcag
gaagaggacaagccactgttcggatctctacaaaacagacaaatcgcaggactcaaggcc
attgtccagtttgcagcatcacagagacttaaaagctcccagggagttatccagaggcac
tttgcagacatgataggagtgctactaccagtcctgagcaggaagaacacaccctccatt
ctagatgtggactttttccatcttttggtgggcttggtgttgtccatgccttcattatac
caggaggagggaatagacctgcagccgtcagctgtaagctccgccttcaacaacatgtac
atctttcacctggtcaccatggctcacattcttcaggtcctcctcacctcctcagatttt
ccagctgcaggagatggagaggagtctgaagaggcgagatccgcagcagacttgtacaca
gcagtgtcacagcacactggaaggctggttccagatctgtccggtggctctgtggcacaa
cggataaaggcaggaattgaaccttttctgcgatgtgcggcactatttttcaactgtctt
acaggggtacatactccagaggagcttttaaatgcatctgttacctctccaggacaggtg
gaggcgatgtgtggctacttggcattaccccttaatatatttcagctcttccaggactac
agagatgtggtttctcctctgcttcaaaggtggtgtggaagcccttctatcaccaaagct
ttgcaagggaaaacccagaccgtcagatatccgaggataaggaaccggttgattgagctt
ccagaggattacagctccctcctgaataaagccagccattttcagtgtccaaaatctaca
attgatgagaggaagcatccaactctgtgtctggtttgtggggccatgctgtgttcgcag
agctcctgctgcctcagtcagctggatggggaggatgtgggagcatgcacggcccacgca
gctatgtgcggcgccggagtgggcatgttcctcagaattagagagtgtgaaatagtcctg
atggccagtaggactagaggcagcacgtaccctgctccttacctcgatgattacggggag
actgaccctcatcttggaaggggcaatcctctgcacctttgcacggagcgttacaggaag
ctaaaccagctgtggcagcagcattgcatcctggaagaaatcgcccgcagcctggaggtg
gtcaacgtcatgtttgccttcgagtggcagctggtgtaa
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integrated database retrieval system
