Cyprinodon tularosa (White Sands pupfish): 119771508
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Entry
119771508 CDS
T07496
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119771508 (soga1)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
119771508 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
119771508
NCBI-ProteinID:
XP_038123470
LinkDB
All DBs
Position
Unknown
AA seq
1883 aa
AA seq
DB search
MTKTKEVDVHNSPTHLAFASPKERRLHLRQKMESGGTEAQQQQQQQSPRAEAAALPAAQR
AHTGDKKKVNRAPSPARPKDVPGWSLTKIRGGIGSASLSVKPGAIHLGSRVSRRSPVGSL
TGKDGKAERGGGKPAGKSSPLSKTSAFKAAKSGSGRRKVSDASTGSEDLSKDSGCAAGKL
SPTDSSSELSDCASEENKLSADAASSDAESRSSRGPEGEQPLRDRAAQSSCSRDDKDRLC
LSMEAGEESISPGEERSVTSMDSRVPASTSLAFSDLTEFTDGMHEEYLREIEELRSENDY
LKDEMEELRSEMLEMRDMYMEDDVYQLQELRQQLEQANKTCRILQYRLRKAERRSLRVAQ
TGQVDGELIRTLEQDVKVAKDVSIRIHSQLDSVEKKRGRLEQENEELRVRLQDLEVAKQV
LQQEMDKNSQKKRAVRTSNKLDKKPAPQEDNSDLKCQLHFAKEESALMCKKLTKLVKDSE
AMKEELAKYRSLYGDINTSLTVEEVADSPHTREAEVRVHLKLVEEEANLLSRRIVELEVE
NRGLRAEMDEMKGSQDGAQELSGVGGGQGGGLCLTGGAVVLGGGASSENVMELQRHLQFV
EEEAELLRRSLIEMEEQNKLLMNEINRYKSELPPATSTLSSESLMSLTDGLLNDSVQDGA
VLISTDTPTPEEELKLARLQIGEMSGKMKKLQYENRVLLSNLQRCDLASYHAPSSSSSSL
RLALETDAEAGDSAECLPLSPPHRKEPVGGENDAIEMDEEKKKIEDNADATTSLSGCLGQ
KDRDALLAMRDQARLVSTAIQLLTSPESSCLPSSSPSLYHKVCSNEAAEPCDLEKPQPHC
QISELSDLADRPLVGALTSRLQALHTQLQAFVEQVDSLAKPPLGGRDGQVEGASPPASPC
TSLPCSGDNEENQPEEKQPDCRDQSDPDEKDETNEISQTVSNQTENQEASQTEQEEKEMD
HPTPAQVSDLGEQMSLEKESAGEAQEELHKERQNHREVSLRLSQLQEEHQKALLRRDFQL
QSLGLQARLQQKLWSQERNLLVQESQHLKQALLLLSLKLRCFLKQWRLGCQKDAEGKDVL
EMNSLKELYLLLEEESLPSPTNAADKRASADEQPLSPTIKSSAVSNTLADLKVALQDLSA
ELRQERQGSQELTQQFAKAKASWEVERTELKSLITQFETKMGKTTAAMTAAETLDPLDLK
AALKKEREEHQHLLAESYAAVMDLTKQLQIGERNWSREKLQLLERFSQERAQWEQRLREA
SMQQEKMKPPGEEVTVDTAVVNGSASPRVKSTVEDSEVNKSTCEKDKELFGSLPLFTRAE
LGDISLKNWTSLTNETPEVSDTCKTWDGPSGSSSSFTASDMDLDFVRRSCTAPDRTGIRI
YYSPPAVRRIEHRRRHQESLDADHSGIGSSSLKHTDMDDGVASLSALDAQQQQPAVCFTS
SYEQWLSSLSKQHRELLESRSSSISTSMPSVFSSSVSSGAVNRAVDGRTSSSPFQDLEIG
DIAANLSDDMKEMTNCVRQAIRSSSLERKSSKEPVSQPVGVCSKSTQTVAQSISIGLQTE
SLASSRGAGLHTKAWSPRPSSTTTSSLASVRTRQISTSLDKVHSRIERPCCSPKYGSPKL
QRRGSSGSTSRLDGASSSRDRSMWSLHQRPIGGGGGSAWARSTTTRDSPVLNGLTDGLSS
LFSVVEQSGSTESLWRSEIGPSQTTSPARQPPAAGKPSGAVVCGSDSSSQRYGGLVQEFF
RNVCSRPSPGGVHLPAERLQRDSLAVLGGVGIMGSLSSLDEPTVGGAAALAGLSGGSDSV
TRIVNKRFMRQTTGEEMISILGGGKEAASNSIAAAPGVEDAPCDCAAPSSCVVRSSRAAS
RHCKHRLQESPAGAEEKGDACNE
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaacaaaggaggttgatgtccataattctccgactcacctcgccttcgcctcg
cccaaggaacggagactccatctccggcagaagatggaaagcggcgggacggaggcgcag
cagcagcagcagcagcagtcaccccgggctgaagcggctgcgctccccgcggcgcagcgc
gctcacaccggcgacaagaagaaggtaaaccgggcaccctctccggcgagaccgaaggat
gtacccggatggtcgctaacgaagatccgcggagggatcgggtccgcctcgctgagcgtc
aaacccggagccatccatctgggcagccgcgtttccaggcggagtcccgtgggtagcctc
actgggaaggacggcaaagccgagagggggggcggtaagccggcaggaaaatcctccccg
ctctccaagacttcggctttcaaagcggcgaaaagcggcagcggtcggaggaaagtgtcg
gacgccagcacgggatccgaagacctctccaaagactccggctgcgccgcagggaagctg
tcccccacagacagcagctccgagctttccgactgcgcgtccgaggaaaacaaactgtcc
gcggatgctgcgagcagcgacgcggagtccaggagcagcagaggtccagaaggagagcag
ccgctcagggacagagccgctcagagcagctgctccagagacgacaaggaccgactgtgt
ctgagcatggaggccggggaggagagcatctcacccggcgaggagaggtcggtcacctcg
atggacagcagggttcctgccagcacatccctggctttctcagacctcacagagttcact
gatggcatgcatgaggaatacctcagggaaatagaagagctcagatctgaaaacgattac
ctcaaagatgagatggaggagttgaggtctgagatgctggaaatgagggacatgtacatg
gaggacgatgtctaccagctgcaggaactgcgccaacagctggagcaggcaaataaaacc
tgccgtatcctgcagtaccgcttgaggaaggcagagcggcgctctctccgcgtggctcag
acggggcaggtggatggagagctgattaggacgctggagcaggatgtgaaggtggcaaag
gacgtctccattcgtatccatagccagctagacagcgtggagaagaaaagggggcgtctg
gagcaggagaacgaagagctaagagtccggctgcaggacctggaggtcgctaaacaggtc
ctgcagcaggagatggacaagaactcccagaagaaaagagcagtacgaaccagcaacaaa
ctggacaagaagcctgctccccaggaggacaattcagacctgaagtgtcagctccacttt
gccaaagaggagtcagccctgatgtgcaaaaagctgaccaagttggtgaaggacagcgag
gccatgaaggaggagctggccaagtacagatcgctatatggagacatcaacacctcactc
actgtggaggaggttgctgactctccgcacactcgagaagctgaggtcagagttcatcta
aagctagtggaggaggaggccaacctgctgagtcgacgcatcgtggagctggaggtcgag
aacaggggcctccgagcagagatggacgaaatgaagggcagtcaagacggcgctcaagag
ctttctggtgttggtggtggtcaggggggagggctttgtctaacaggaggggccgtggtg
cttggtggaggcgcctcatctgaaaacgttatggagctccagaggcacctccagtttgtg
gaggaggaagctgagctgctgagacgatctctgattgagatggaggaacagaacaaactc
ctgatgaatgagataaatcgctataaatctgagctcccacctgcaacctccaccctatcc
tccgagtccctgatgtctctgaccgacggcctgctgaatgactcggtgcaggacggggct
gtgctcatcagcaccgacactccgacccccgaagaggagctgaagctggcgaggcttcag
atcggagagatgagcggcaaaatgaagaaactgcagtatgagaaccgcgtactgctgtcc
aacctgcagcgctgcgatctcgcctcttatcacgctccttcctcctcatcctcctcatta
agactggctttagaaacagatgcagaagcaggagactcagccgagtgtctccctctcagc
ccaccccatcgcaaagagccagtaggaggagagaacgatgccattgagatggatgaagag
aaaaagaagattgaggacaacgctgatgcaacgacctcgctctctgggtgcctggggcag
aaggaccgcgatgccttgttggccatgagggatcaggctcgtttggtttccactgctata
cagctgctgacctcccccgagtccagctgcctgccctcctcctctccttccttgtatcac
aaggtctgcagcaatgaggcagcagagccgtgtgacctggagaaacctcagcctcactgc
cagatctcagagctgtctgatttggcagaccgccctctggttggtgctctaaccagcagg
cttcaagctctgcacacccagctgcaggcctttgttgagcaggtagacagtctggctaaa
cctcccctagggggaagggatggtcaggtggaaggagcatcccccccagcatcaccttgc
acctccttaccctgctcaggagataacgaggaaaaccaaccggaggaaaagcagcctgat
tgtagggaccaatcagatccagacgagaaagatgaaactaacgagatcagccaaactgtc
agcaaccagacagaaaatcaggaagccagccagacggaacaggaggagaaggagatggat
catcctacgcctgcacaggtctctgacctcggggagcagatgtccctagaaaaggagtca
gctggagaagcccaggaggagctgcacaaagagagacagaaccacagagaagtcagtctc
agactttcacagctccaggaggagcaccagaaggctctgctccgacgggacttccagctt
cagagcctgggcctccaggctcggcttcagcagaagctgtggagtcaggagaggaatctg
ctggttcaggagtcccagcacctgaaacaggccctgctgctgctcagcctgaaactccgc
tgcttcctcaaacagtggaggctgggctgccagaaggatgcagaggggaaagatgttttg
gagatgaacagtctgaaggagttgtatctgctgctggaggaggagagcctgccaagcccc
acgaatgcagcagataagagagcctctgcagacgagcagccgctcagccccacaataaag
tcgagtgcagtgagcaacactttggcagacctaaaggttgctctgcaggacctgagtgca
gagttgagacaagagagacaaggctcccaggaactcactcagcagtttgcaaaggccaaa
gcgtcgtgggaggtggagaggaccgaactaaagagcctcatcacgcagtttgagacaaaa
atgggcaaaacaacagcagccatgacagcagctgaaaccctggaccctctggacctgaag
gcggctcttaaaaaggaacgtgaggaacaccagcacctcctcgccgagtcgtacgcagcc
gtgatggacttaaccaaacagcttcagatcggagaaaggaactggagcagagagaagctg
cagctgctggagaggttcagccaggagagagctcagtgggaacagagactgagagaggct
agcatgcagcaggagaagatgaagcctccaggtgaagaagtcacagtggacacagctgtt
gttaatggatcagcatcaccgagggtcaaatcaacagtggaggattcagaggttaataaa
tccacctgtgagaaggacaaagagctgtttggttcattgcctctttttactcgagccgag
ttaggtgacataagcttgaagaactggaccagcttaaccaatgagaccccagaggtttct
gatacttgtaaaacctgggacggtcccagcggctcctccagcagcttcacagcctccgac
atggatctggattttgtgcggaggagctgcactgctccggaccggaccggcatccgtatc
tactacagccctcctgctgtgcggcgtattgagcaccggaggagacaccaggagtcttta
gatgcggatcactcaggcattgggagctcctctctgaaacacactgacatggatgacggc
gtagcttcactcagtgctcttgatgctcagcagcagcagcctgccgtgtgttttacatct
tcttacgagcagtggctcagttcgctgtccaaacagcaccgggagctgctggagagcagg
agcagcagcatttccacctccatgccgagtgtgttcagcagcagtgtcagcagtggggcg
gttaacagagcggtcgatgggaggacttcctcttctcccttccaggacctggagatcgga
gacattgccgccaacttaagcgacgacatgaaggaaatgactaactgtgtccgccaagct
attcgctcttcttctctggagaggaaatccagcaaggagcctgttagtcagcctgttgga
gtatgcagcaagtctacccagactgtcgctcagagcatcagcatcgggctgcagacagag
agcctggccagcagcaggggggccgggctgcacaccaaagcctggtcccctcgtccgtca
tcaacaacaacctcctctctggcgtcggtccgaactcggcagatctcaacatcactggat
aaggtgcacagccgtatcgagaggccttgctgctcccctaaatatggatcacctaaactc
caacgaagaggatcttctggttccacttccagactggatggggcttcctccagcagggac
cgcagcatgtggagcctacatcagaggcccatcggtgggggcggcggctctgcttgggct
cgctccaccaccacgagggacagccccgtccttaacggccttaccgacggcctctccagc
ctttttagcgtggtggagcaatctggaagcacagagtcgctctggaggagtgaaatagga
ccaagccagaccaccagtcccgctcggcagcctcccgccgcaggaaaaccctccggcgct
gtggtttgtggatctgactccagctctcagcgctatggagggctggtgcaggagttcttc
aggaacgtctgcagcaggcccagcccaggcggggtccacctccctgcggagagactccaa
agggactcgctcgctgtcctgggaggagtgggcatcatggggagtttgagcagcttggat
gaacccacggtcggaggggctgctgcgttggctggattgagtggaggcagcgacagcgtg
accaggattgttaacaagaggtttatgaggcagacgaccggtgaggagatgatcagcatc
ctgggaggaggaaaggaagcagccagcaacagcatagctgcagcaccaggagtagaggat
gcaccctgtgattgtgctgctccgtcctcctgcgtcgtccgatcatccagagcagcctcc
cgccactgcaagcaccggctgcaggagtctccggccggagcagaggagaagggagacgcc
tgcaacgagtga
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integrated database retrieval system
