Cyprinodon tularosa (White Sands pupfish): 119771520
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Entry
119771520 CDS
T07496
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119771520 (nphp4)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
119771520 (nphp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
119771520
NCBI-ProteinID:
XP_038123489
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MVKAEERNSVADGWEEAFKKNRLVPPSSQTVRQAEENHLISACGFQLLFNSLTAAHLQQD
PTAEEDVTYQLRVTLFDRKLQHFFGKTWKSLSKKRKSNKISFNEVLYLHTSLLLPGTLAI
VEFASLCPKPDSSNLALGKGFTILELFTNRPEGPSTDGGRRLNLYHGSPRGLLHPSLKDS
LDYGNILKVIDGAHLNCVVKTHPSLNCAMHLLPENALVSGKDNISGLIPSPTGDSLLRPQ
LLKMTSFTLDRLTISLQPSLEKFESLLLQLINADCQNTKQPDPEDVQKTVVIQERRLHVG
VHNGWCFLDKPQVVVLEPVASGVRGRTDSASKKSLLVKDSSATSPRPQMLGLRSSLEITL
ANNQALAIVFQLEYVFSAPIGRETMLSATSTSRAAFLQCLRWGVWCPFQDLADWKGKEVK
LVLQGGAQPNPFGVMVYSTETSVQAPSPAAVSAPSTVQEKDLMRFWLQSSVEKKPSSPKA
SLKTKQEDVTRERASPIQSEKQIPSYSVLDSPQGPGLSLSQLAATSRYPTISHFSSALPW
QQSFPSLLHPSPLASAHQLSHVACSAVSSITHLEMDLQREGGEVTAKDVEGDQLQELPFT
PVHAPVINLGINVPSSCSVSSRSSLAHLFSAGFPEIVDCSGQVAEVLDPTEPVPFDPQRE
EADLLQGNLLVFQFLAFTRIPSGGVESDWPRNIYVTFQFYRFPPVTSQQLRLVTSDKVQH
RASEALPCVLATINKDGSVNHGSPGLQLQFRVDDGFLRPGEKQWFLRHLALHTMHIDVWD
SDSLLLIGSTAIELKYLLRQGKSAVQALHELEVLTTDYVGEDTLLTNADLGQRSASTPMT
VCTIVRGRLHIRTGNIGCPVDRSKKREVDGIASHSHIIKPAPVSGGFKGGPLSPRNALQL
NARNTAHRLDGDRMLLHRDRGTAHDITTEAPNLNSDSRLRKLDCMAAVRQLEAKQNTKAT
DVTDLKPAARIIRELPPNDEYSKAEGIANMLSQAITTQHLLYASLGSAEYMEFVLKNPFN
VPKTVTIHTDDSELSVITDTEEWRYFKGLTKTTTPLEENMFHMEEGAPGPKVYVRPKESV
HIPLKYQSFLCNHTIAVQGPSFLPTSKSSQMAKKNPSNIINAKIIKVTFRAEDGKPMAIC
QVNVQPTPHVVDQTFRLYHPELSFLKKAIRLPPWQDPTAEDPNFWTHISVRCSDPNIICQ
TRMLVPGEPQDVYLKVPGSPSPQIKMFFVMIFTDKWMAAPSQIWQVYVHFLERVDVSCVT
GQRSCQSLVLRGKQAVRKIKCFSSHPSEIEVDPAGVFVLPPAAVQELQLRVQPWQAGSRF
LYVNAVDMEQQRLVAAWLLCLNVHRPVLSKAFEVSVPVGNGRGSSKKITYTNPYTSTRTF
LLRSDHPDLLQFREDKFQVGGGESYPIGLRFAPTQSPGSAEILVYVNNLEEKTEETFCVK
VNYS
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagcagaggagaggaacagcgtggcagacggctgggaagaagcgtttaagaaa
aaccggctggttcctccgtccagccaaacagtccgccaggctgaggagaaccatctcatc
tctgcctgtggcttccagctcctcttcaacagcctcactgcagctcacctccagcaggac
ccgacagctgaggaagatgtgacctaccagctgcgagtgactctcttcgacagaaagctg
cagcacttcttcgggaaaacgtggaagagtttatccaaaaaaaggaaaagcaacaaaatt
tccttcaatgaggtgctgtacctccatacatccttgctgttgcccggcactctggccatc
gtggagttcgcgtctttgtgccccaaaccagacagctccaatctggctttggggaaaggc
ttcactatcctggagcttttcaccaacaggccagagggtccaagcaccgatggaggcaga
aggctgaatctgtaccacggatcacccagaggcctcctccacccctcattgaaggactca
cttgactatggcaatattttgaaggtaattgatggagcacatttgaattgtgtggtaaaa
acacatccttccctgaattgtgcaatgcacctccttcctgagaatgctctggtttcggga
aaggacaacatatccggactcatcccttctccaacaggagattctctgctgaggcctcag
ctgctcaagatgacgtccttcaccctggatagactgaccatttccctccagccttccctg
gagaagtttgagagccttctgttgcagctcatcaatgctgactgccaaaacacaaaacaa
cccgatccagaggacgtgcaaaagacggtagtcatccaggaacggaggcttcacgtcgga
gtgcacaacggctggtgtttccttgataagccccaagtggtggtcctggagcccgttgct
tcaggggtcagaggacgaacagacagcgcctctaagaagagcctgctggtcaaggacagc
tcagcaacatcgccgcgtcctcagatgctgggccttcgcagcagcttggagataacactg
gccaataatcaggctttggcaatcgtttttcagctagagtacgtcttctccgctcccata
ggccgagagactatgctgtctgctacctccacatccagagctgccttcttgcagtgcctt
cgctggggagtttggtgccccttccaggacctagctgactggaaaggcaaagaggtgaag
cttgttctgcaaggaggcgcacagccgaacccctttggagtgatggtctacagcacagag
acatctgtccaagctcctagcccagcggcagtttctgctccaagcacagttcaggagaag
gatctgatgagattttggcttcagtccagtgtggaaaagaagccatccagcccaaaggca
tctctaaaaactaagcaggaggatgtgacacgagagagagcttcacctatacaaagtgaa
aaacagatcccttcctactctgttcttgattcccctcaaggccccgggctctcactgtct
cagctggcagctacttcacgctacccgaccatcagccacttcagctcggcgttaccgtgg
caacagtcatttccttctctgctccatccttccccgttggcatcggcccaccagctgtca
catgtcgcctgttcagctgtcagcagcatcacccacctggagatggaccttcagcgggaa
ggaggagaggttaccgccaaggacgtagaaggagaccaacttcaagagctgcccttcacc
cctgtccatgctcctgtcattaatctgggaattaatgtgccgagttcctgctctgtcagc
tccagaagctccctggcacacctcttctcggccggttttcctgaaattgtggactgcagc
gggcaggtggcggaagtcctggacccgactgaacctgtgcccttcgatcctcagcgggag
gaggctgacctcttacagggaaacctgctggtctttcagtttctggcatttaccaggata
ccttcaggaggtgttgaaagtgactggcctcgcaacatctatgttacttttcagttttac
cgcttccctcctgtcacttcccagcaactgaggctggtgaccagtgataaggttcagcac
agagctagtgaggcacttccttgtgtcttagccaccatcaacaaagacggatctgttaat
cacggttctccaggtctacagttacagttcagagttgatgacggttttttgagaccagga
gagaagcagtggtttctccgccatctggccctccacaccatgcacattgacgtctgggac
agtgactcgttgctcctcatcggttctacggccatcgagctcaagtacctgctgcgtcag
ggaaagtctgcagtccaggctctccatgagctggaggttttaaccaccgattatgtgggt
gaggacactttgctgactaacgcagatctgggtcaacgctcagcttctactccaatgaca
gtttgcaccatcgttagaggccggctccacatacgaacgggcaacataggatgtccagtt
gaccgtagcaagaagagagaagtggacgggattgcatctcattctcacattatcaaacct
gctccagtcagcggtggttttaaaggaggacctctgtcacccagaaacgccctccaactc
aatgcgagaaacactgcacacaggctggatggagatcggatgctgctgcacagagatagg
gggacagcccatgacatcaccaccgaagccccaaacctgaacagtgatagcaggttgcgg
aagctggactgcatggctgccgtgcgtcaactggaggctaaacaaaacaccaaagcaact
gatgttacggatctgaaaccagcggctcgtatcatcagagaacttccacccaacgatgag
tacagcaaagcagagggaatagctaacatgctgagccaagccatcaccacccagcacctt
ctctatgccagcctgggctctgctgagtacatggagtttgtcctaaagaatcccttcaac
gtccctaagacggtcaccatccacactgatgactccgagctcagtgtcatcactgacaca
gaggagtggcgttacttcaaaggccttacgaagaccactacgccactggaggagaacatg
tttcacatggaagaaggagctccgggtccaaaggtttatgtccgacccaaagaaagtgtc
cacattcccctgaagtaccagagcttcctatgcaaccacaccatagctgtccaggggccg
agttttctgcctacaagcaaaagttcccagatggccaagaagaatccgtccaacattatt
aatgccaaaattatcaaggttacatttagagcagaagatggaaagccgatggccatctgc
caagtgaatgtgcagccaacaccccacgtcgtggaccagactttccgactttaccatcct
gaactttctttcctcaagaaggccatccgcctgccgccgtggcaggacccaacagctgag
gacccaaatttctggactcatatttctgttcgctgcagtgaccctaatatcatctgccag
acgaggatgctggttccaggagagcctcaggatgtgtacttgaaagtaccagggagtcct
agtccacagataaagatgttctttgtgatgatattcactgataagtggatggcagcgcct
tctcagatctggcaggtttatgtccattttctggagcgggtggacgtcagctgtgtgact
ggccagagaagctgtcaatcactggttctgaggggaaaacaggctgttcgcaagatcaaa
tgtttctcatcacaccccagtgaaattgaggtggacccagccggtgtgtttgttttgcct
cctgcagctgtgcaggagctccaactaagagtccaaccatggcaggccggcagccgcttc
ctgtatgtgaacgctgtagacatggagcagcagcggctggtcgctgcctggctgctgtgt
ctcaatgtccaccgtcctgtactgtcaaaggcattcgaagtgtccgttccagttggtaat
gggcgtggcagctccaaaaaaatcacttacaccaacccttacaccagcacacggacattt
ctgctccgctccgaccatcccgacctgctccagttcagagaggataagttccaggttgga
ggaggagaaagttaccccatcggtttacggtttgctcccacccagagtccaggctcggcg
gagatcctggtttacgtcaataacttggaggagaaaaccgaggagactttctgcgtaaaa
gtcaactattcttga
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