Cyprinodon tularosa (White Sands pupfish): 119771874
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Entry
119771874 CDS
T07496
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119771874
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119771874
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119771874
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119771874
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Protocadherins
119771874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
119771874
NCBI-ProteinID:
XP_038123999
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MDLKDYYLLGALLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSNTGEIFTTSNRIDREKLCPGLSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNKPVFKESQIEVHIPENSPIGTSVVQLQATDADIGANADIHYVFGTQVSPATKR
LFALNATSGLITVQRPLDREETAIHKLSVLASDGSSSPAKATVSINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNQPIFTQPVIELAIMEN
NKRDLFLTTLTATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQTQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVKAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPAVTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQNGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPDDPAHEPIN
GTISLPTELEEQGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASESSSQGGFKTKGPMHTRQQGTLTRART
ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGSLL
THPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPTLGSYQQPKSPVSSFGSQREWGQKDKLLNGHTLSRTWKNESGRSEHFGDRKQFG
SGEGHFTCSSRADIPLVSLKSCQSASCPDSPKDQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaagactattacctgttgggtgctctgcttgcctgcatatggcttgatcct
tccattgctcaagaattaatatatcccatcagggaggaattgcaagaaaatgtcctcatt
ggaaatataccaaaggacctcaacatttcccatacaaatgctgccactggagcaagtgct
aatcttgtgtaccgactggtttccaaagctggagacaacccactggttcgtgttctgagc
aacactggagagatattcacaacatcaaacagaatagacagagagaagttgtgccctgga
ctctcatttgaggacagcgagtgctcctttgaaattgaagtggtcatcctgcctaatgat
tatttcagactgattaagataaaaataattgtcaaagatacaaatgataatgcccccatg
ttcccatcccctgtgatcaacatctccatcccagaaaacactcttattaacagccgcttt
gctattccttctgccactgacccagacactggccccaacagtgtccacaaatacgagctg
atcaatgggcaaagtgccttcggtttagacatcgtggagacgcctgagggggagaagtgg
ccccagcttattgtgcagcagaatcttgaccgggagcagaaggatacttatgtgatgaaa
attaaagtagaggatggagggagcccacagaaatccagcactgccattcttcaggtcact
gtaacagatgtcaatgataacaagccggtgttcaaagagagtcagatagaggtgcatata
cctgagaactcccccataggcacatctgttgtgcagctccaggctacagatgcagacata
ggggcaaatgcagacatacattatgtatttggaactcaagtgtctcctgcaactaaaaga
ctttttgcattaaatgcaacatctggcttaattacagtgcagagacctctggacagggag
gaaactgccattcacaagctttctgttttggccagtgatggcagctcaagtcctgccaaa
gctactgtttctataaatgtgactgatgttaatgacaatccacctaatatagacctcaga
tacatcatcagtcccattaacggcactgttttcctctcagagaaggatcccatcaatact
aagattgctctcatcacagtttcagacaaagacacagacataaatggcaaggtcatttgt
ttcatagagaaggatgtacctttccatctgaaagctgtgtatgacaaccagtatctgcta
gaaacatctgctctgcttgactatgaggggacgaaggaatacaactttaaaatagttgcg
tcagattctggaaagccgagtttgaatcagacagccttggtgagagtgaggctggaagat
gagaatgacaaccaacctatttttactcagccagtcattgagctggccatcatggaaaac
aacaaacgcgacctgttcctcactacccttacagctacagatgaggacagtggcaagaat
gcagaaatagtctatcagctgggaccaaatgcatcattttttgatctggatcgcaaaact
ggagtcctaactgcatctagggtttttgatagggaggatcaggacagattcctcttcact
gtaacggcaagagataatgggaccccccctttgcaaacacaggcagctgttattgtaact
gtgctggatgaaaatgataacaacccaaaattcacacataaccactttcagttctttgtg
tcagagaatctgcctaaatacagcacagtaggggtgattactgtgacagattcagatgct
ggagaaaatgctgctgtctctctttctatactgaatgacaatgagaactttatactagat
ccatactctggagtgataaaatctaatgtgtcatttgacagggagcaacagagctcctat
acttttgatgttaaggctgtggacagtggcagacctccttgctcctctgctgcaaaggtg
accatcaatgtcattgatgtcaatgacaacacaccaattgtcatctacccaccctctaac
acctctttcaagcttgtccctctgtcctctattccgggatctgtggtagctgaggtgttt
gctgttgatggggacacaggaatgaacgctgaactgaaatacaccattgtgagtgggaat
aacaaaggtttattcagaattgaccctgtgacaggaaacattacgctggaagaaaagcct
gcagtaacggacataggcttgcacagattagtagtcaatatcagtgacctggggtatcca
aaatcactccataccctggtgctagtgtttttgtatgtcaatgacactgtgggcaattca
acactcatttatgatctcattcggcgcaccatggagaccccgatagacagaaacattggt
gaaagcagtgaaacttatcaaaatggtgactatttaactataatgatagcctttgttacc
ggtgcattggtggtgattattgtcatctttgtgactgtgctgctgcgatgccgccatgcg
tccagatttaaagctgcacaaagaaaaaagcaaggggctgagtggatgtcacccaacaca
gaaaacaagcaaaacaaaaagaaaaagcgtaagaaacgaaagtcccccaaaagctccttg
ctcaactttgtcaccatcgagggaaacaaaccagatgatcctgcgcatgaaccgatcaat
ggaaccatcagtctgcccactgagctggaagaacaaggaattggacggtttgattggaat
gccacacctactaccacattcaaaccaagcagccccgacctggctcgacactacaagtca
gcctcgccacaatcggccttccacctcaaggccgacacacctgtctcagtcaagaagcat
catgtgattcaggaactcccactggataacacatttgttgggggctgtgacaccctttcc
aagagatcctccacgagctccgaccacttcagtgcctcagagagcagctcccaaggaggg
tttaaaacgaaggggcccatgcacaccagacagcagggaacattaactcgtgcccgaact
gaactgaatcctgaatatctggatctccgtccccgagcagagctgaatcctgaatattgg
accccttgcacccctttatcacagcggcgcgtcacgtttcacctgccggatggttctcag
gaaagctgcagtgacagcggtttgggggaccacgagcctgtaggcagtggctctctcctc
acacatcctctccctctggtgcaggcgcaggatgacttctacgagcaggcctccccagat
aagaggactgaagccgacggcaactcagatcccaactccgatggacccctgggaccacgt
gggcttgtggaagctacagagatgtgcacacaggagtgccttgtcctcggacattcagac
aactgttggatgcctcccacgttaggatcataccagcagcctaagtcgcctgtgtccagc
tttggctctcagcgggaatggggtcagaaggacaaacttctcaatggacacactctgtca
agaacctggaaaaatgaaagtggacggtcagagcattttggcgacaggaagcagtttggg
agtggggaaggacatttcacctgcagcagcagagctgacattcctttggtgagtctgaag
tcttgccaatcagcatcctgcccagacagtccaaaagaccagcagctataa
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