Cyprinodon tularosa (White Sands pupfish): 119771919
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Entry
119771919 CDS
T07496
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119771919 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119771919 (xrcc5)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
119771919 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
119771919
NCBI-ProteinID:
XP_038124088
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSSPGEEPPFAMAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNSLSQDGQYQNIKVHRHLMVPDFELLEEIEHQIHPENQQADWLDALVVCMDVLQNET
QGKKCDRLNIVLLTDLNTEASSDKLDVIINNLKQSGITLQFFLPFQVEDEEDGKGDEDGP
GSGHPGRGKGLSKEQRSGLEMVKHIMLSLDEEEGLDEIYTFRNAVEQLCMFKRIERRPMA
WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVDAQTNEKDDVKRETVYCLDDDNETEVQ
KEDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTRKNLVLRHQFMGTQIVKIFP
ARDDEHAGVALSALIRGLDELNMVAIVRYAYDRRSNPQVGAAFPCIKPDYECLVYVQLPF
MEDLYGRQFTFPSLENNKKIAPSETQLAAVDSLIDSMMLVAEDENQEVRDLFKPHHLPNP
AFQRHFQCLHHRAVHPDSPLPPMESWLEAALDRPEVIKARCQAPLEEIKKLFPLTEVEKK
KKLKTSAQIFGKDSEEPDAKKAKEDEAEEEYNLADIAEGSVTSVGSVDPARDFRALIKQK
TIPFGEVCQQLTHRIEQLLSNKTMQYYMKSITCIQAFREQSVKQGNADLFNSYLQSLKRS
IPSRALEVFWDLLVQDAVTLISKDEVEGSSVSKNEANQFLLAEEKKEQAAPEPVEDAGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagcaaagtcagccctggtgctctgcatggatgtgggcttctccatgtccaac
tcatcccctggggaagaacctccctttgctatggctaagaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagactaaggatgaactggctttggttctgtttggcaccgat
tctaccaaaaactctctgagccaggatgggcagtaccagaacatcaaggtgcatcggcat
cttatggtgccggactttgaattgctggaggagattgaacatcagatccaccctgagaat
caacaggctgactggctggatgctctggttgtctgcatggatgttcttcagaatgaaacc
caagggaagaagtgcgaccggctcaacattgtcctcctgactgatctgaacacagaagcc
agttcagacaaactggatgttattattaacaacctgaaacagtctggaatcaccctgcag
ttttttttgcctttccaagtggaggatgaggaagatggtaaaggagatgaagacggaccg
ggttctggacaccctgggaggggcaaaggtctctccaaggaacagcgcagcgggctggaa
atggttaaacacatcatgctgagtctggatgaggaggagggtctggatgaaatttacaca
ttcaggaatgctgtggagcagctgtgtatgtttaagcgcatagagaggagacccatggcc
tggccctgtcagctcaccatcggcagctctctgtctatccgcatagttggctacaaagca
gtgacagaagagaaactgaagaaaatgtggattacggtcgatgctcagaccaacgagaaa
gatgatgtgaagcgagagactgtttactgcctggatgacgacaatgagacagaggtgcag
aaagaagacattattcaaggtttccgttacggaagtgacatcgtacctttctccaaagtg
gaccaggatcagatgaagtataagcatgatgggaagtgctttgctgttcttggcttcacc
agaaagaacctggttcttcggcatcagttcatgggcacacagattgtcaagatatttcct
gcacgggatgatgagcatgcaggtgtggccttatcagctctgatccgtggtctggatgag
ctcaacatggttgccattgttcggtacgcttatgaccggcgcagcaatcctcaagtggga
gctgccttcccgtgtatcaagccagactatgagtgcctggtgtacgtccagctgcccttc
atggaggatctttatggaagacagtttacgtttccttctcttgagaacaacaagaagatc
gctccatcagagacgcagctggcagctgtagactctctcatcgactccatgatgctcgta
gcagaagatgagaaccaggaagtgagggatctgtttaagccccaccatcttcccaaccct
gccttccagagacacttccagtgtctgcaccacagggctgtacaccctgactctcctctt
ccccccatggagtcatggctggaggcagctctggatcgccctgaggtcattaaggcacgc
tgccaagctccactggaggagataaagaagttgtttccactcacagaagtagagaagaaa
aagaagctgaaaacaagtgctcagatttttggcaaagactctgaggagccagatgccaag
aaggccaaagaagacgaagcagaggaggagtataacctggcagacatcgctgaaggatct
gttacttctgtgggaagcgtcgatccagcgcgggacttccgtgctctgatcaaacagaaa
actattccgtttggagaggtctgtcagcagctgactcacaggatagagcagctgcttagc
aacaagaccatgcagtactacatgaaaagcatcacctgtatccaggcttttagagagcag
tctgttaagcaggggaatgctgatctgttcaacagttacctccaatccctgaaaaggagt
attcccagcagagccctcgaggtcttctgggacctgcttgttcaagatgctgtgactttg
atcagcaaggacgaggttgaaggaagctccgtgtcaaaaaacgaagccaatcagtttctc
ctggctgaggaaaagaaagaacaagcagctcctgaaccggtggaagatgcaggagatgtt
gatgacttgcttgacatgatgtaa
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