Cyprinodon tularosa (White Sands pupfish): 119771928
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Entry
119771928 CDS
T07496
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119771928 (smarcal1)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119771928 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
Flavi_DEAD
BrnA_antitoxin
Motif
Other DBs
NCBI-GeneID:
119771928
NCBI-ProteinID:
XP_038124099
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MSKQLTAEQQRKIEENRRKALERRAQRQQPPAGVSGAPLQADLSNQRENYRNPNFSLPTR
VGPSSKIESQISSNQTHLPISCQINQNTLNNPPRQINGPASWTSQQLNSPGSTAGGIVGI
KPVQGISVTSGSTSASFYKSSSKPGVQVSTAQPPSSSTLSAPLPAKKAAISVRGKCVPHA
ENRFKVEVGYNAELIAVFKSIPSKTYDPATKTWSFSLDDYTQLMEEVAGIPSVSLRPLEG
IAALDSTSSRPYDGAALAALLKLCNGWQKPGAPTRGQCILVSRKKFEVDISYDPDVIAAF
KQIPTKNYDMTTRTWSFSLEDYKRLMDLLSGMAGVEVEPLPRAVIQAFAASFDGTKAKSL
DVPEADLSSIDPTLTSSLMPFQKEGVNFAVSKQGRLLLADDMGLGKTVQAICIAAYYRNE
WPLLVVTPSSVRFTWAEAFRRWLPSLSPASINVVVKAKENIRSGLVNIVSYDLLSRMDKQ
HPGQPFNVLIMDESHFLKNMKTARCKAALPLLKAAKRVILLSGTPAMSRPSELYTQILAV
RPTLFPRFHEFGVRYCDAQKQNWGWDYSGSSNLGELKLLLEECLMLRRLKSDVLSQLPSK
QRKVVTVTIDGVSTSTKAALSAAAKLLVKDHRSKKEEKEALLIFYNHTAEAKLQAIMEYI
TDMLECGREKFLVFAHHKLVLDHISAELLKKNVSFIRIDGGTPSAERQHLCEKFQYSSKS
CVAVLSITAANMGLTLHSADLVIFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGT
ADDHLWPMIQAKMNVLEQVGLSESNLSDNAVNASFHLKDPSQKSIMEMFQRSFSEEDDFD
EAILMEAANDWEDTPPETTPAPFPNITNVTDGPNKKTIKDFFNR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcagctgactgcagagcagcagcggaagattgaggagaaccgacggaaggct
ttagagcgaagagcccaaagacagcagcctccagcgggggttagtggggctccactgcag
gcagatttatcaaatcagagagaaaattacagaaacccaaatttctctctaccaacaagg
gttggtccatcctctaaaatagaatctcagataagcagtaaccagacccatctacctatc
agctgtcaaattaaccaaaacactctgaataatccacccagacagatcaatggccccgct
tcttggacaagtcagcaattgaacagccctggatcaactgctggaggaattgttggtatc
aagccagttcagggcatctctgtcacatctgggagcacatctgcctccttctacaagtca
tccagcaaacctggagtccaggtctctacagcacagcctccttcaagctccaccttatcg
gctcctttacctgccaaaaaggctgccatctctgtgagggggaaatgtgtgcctcatgca
gagaatcgtttcaaggttgaagtaggatacaatgcagagcttattgctgtttttaagtcc
atcccatcaaagacctatgaccctgccacaaaaacatggagcttcagtctggatgactat
acacagctaatggaggaggtagctggcattccctccgtgtctctcagacctctggaggga
atcgcagctttggactctacgtccagccgaccctatgatggtgcagcattggcagcgcta
ctaaagctctgtaatggctggcagaaacctggcgcaccgactcgagggcagtgcatcctg
gtgtctcggaagaagtttgaggtggacatctcttacgatcctgatgtgatcgcggctttt
aagcagattccaacaaaaaactatgacatgaccacacgaacgtggagcttttcactcgag
gattacaaaagactgatggacctgctcagtgggatggcaggagtggaggtggagcctctt
cccagggcagtaatacaggccttcgctgccagctttgatgggactaaagccaaatcttta
gacgtccctgaggcggacctctcaagcatcgaccccaccctaacctccagcctcatgccc
ttccagaaggagggagtcaactttgcggtgtctaagcaaggccgcctgctcctggctgac
gacatgggcttgggaaagactgtgcaggccatctgtatagcagcatactacaggaatgaa
tggcctttattagtggtgacaccttcatctgttcgcttcacctgggctgaggcctttaga
cgctggctcccctcactgagtcccgccagcatcaatgttgtggtgaaggccaaggaaaac
atacggtctggtttggtcaacatcgtcagctacgacctactgagcaggatggacaaacag
cacccgggacaacccttcaatgtcctcattatggatgagtctcactttctgaagaacatg
aagactgctcgttgcaaagcagccttacctctgctgaaggcagcgaagagggtgattctt
ctttcagggacccctgcgatgtccagaccctctgagctctacacccagatcctggcagtc
agacctacactttttcctcgcttccatgagtttggggtgcgctactgtgatgctcaaaag
caaaactggggctgggactactccggctcctctaatctcggagagcttaagcttttgttg
gaggagtgtctgatgctgcgccgcctgaagtctgatgtcctctcccagcttccctccaag
cagcgaaaggttgtcaccgtgacgatagatggggtcagtaccagcaccaaagctgctctc
tcagctgcagccaagcttctagtcaaagatcatcgcagtaaaaaagaggagaaggaggcc
cttcttatcttttacaaccacacagctgaagccaagctgcaggccattatggagtatata
acagacatgctggagtgtggcagggagaagtttcttgtctttgctcatcataaattagtc
ctggatcacatctctgccgaactgctgaaaaagaacgtcagcttcatccgcatcgacgga
gggactccgtccgcagagcggcagcatctgtgtgaaaagttccagtattcctccaagtcc
tgtgtggctgtgttgtcaatcactgcagctaatatgggtcttaccctgcactctgcagac
ctggtgatctttgctgagctcttctggaacccaggggttctcattcaggctgaggacagg
gttcatcgtatcggacagaccagcagtgtcaacattcactacctggttgccaaagggact
gctgatgatcatctgtggccaatgattcaagctaaaatgaacgtgttggaacaggtgggt
ctgtctgagtcgaacctttcagacaacgctgtgaatgcaagcttccacttaaaggacccg
agtcagaagagcatcatggaaatgttccagagatctttctctgaggaagacgactttgac
gaggccatcctaatggaggctgcaaacgactgggaagacacgcccccagaaacgacccct
gctcctttccccaatatcaccaatgttacagatggccccaacaaaaagactattaaagac
ttttttaacagatga
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