Cyprinodon tularosa (White Sands pupfish): 119772067
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Entry
119772067 CDS
T07496
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119772067
04121 Ubiquitin system [BR:
ctul04121
]
119772067
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
119772067
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119772067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DBD_Tnp_Hermes
NleF_casp_inhib
zf-C2H2_ZNF462_11
hAT-like_RNase-H
EDR1_CTR1_ARMC3_pept
Motif
Other DBs
NCBI-GeneID:
119772067
NCBI-ProteinID:
XP_038124277
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MYRHICGFCWMEIVCVVCFTLVFGLSSKTMDQSRKRKFSPVWDHFDLITENKVKCRICSQ
VLSYSNRSTSTMLRHYRARHEMEERVNTPVISPGASRKQAIDEAVMNMIITDCQPLSLVE
DKGFRELVQLLEPSYVLPCRKAIKTMISQRYEEKKEQIKKELKSAAAVSLTADMWTSMNM
EAYLAVTCHYVNSENHTLCTSMLGVEHFPQQHTAENMAQVKKNLMQEWAIAEKVTCLVTD
AAANMVACVKKLQIRHTICIAHSLNLTVRKSCDQIETLTEIRNKTKHIVTYFRTSTTAKE
KLAQVQLQMGGPVKKLINEVSTRWNSTYLMLERMAEQKESVLVSLASLKSDIPQLTTNDY
KIIEETLRVLAPFNQATVELSEEKRVSGSKVIPMLKMLHLSLQRNALNVTTETAINLVEN
LKRRLLETLCNLESLSVMTMPTLLDPRFKTMAFLSASKANDAVKRLKSECAAVMRNAIPT
QMEDAQAGPSTQPSDSNPDDNLWHQLDIEVKESKANSNVTTDAIIEVQRYISEENTPRSQ
DPLQYWKSQRLNYPTLYKLAMTFLCTPSSSVPCERVFSKAGEMVCKRRNRLGPKMLTQLM
FLNKNV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgacacatttgtgggttttgttggatggagatagtttgtgttgtttgctttaca
ttggtttttggcttgtcatctaaaactatggatcaatcaaggaagaggaagttttcaccc
gtgtgggatcattttgatcttatcactgagaataaggtgaaatgtaggatttgctcccag
gtgctgtcttactctaaccggagcacttccacaatgctgaggcattaccgtgcccggcat
gagatggaagaacgagttaatactcccgtgattagccctggtgcttccagaaagcaggcg
attgatgaggctgtaatgaacatgatcattacagactgtcagccgcttagccttgtggaa
gacaaggggttccgagagctggtccaactccttgagccctcatatgttctgccatgcaga
aaggctatcaagaccatgattagccagaggtatgaggagaaaaaggagcaaattaaaaaa
gaactgaagagtgcagctgcagtcagcctaacagctgacatgtggacatccatgaacatg
gaggcttacctggctgtgacctgtcactatgtcaacagtgagaaccatacactgtgtaca
tcaatgttgggagtggaacacttccctcagcagcacactgctgaaaatatggcccaagta
aagaaaaacttaatgcaggagtgggccatagcagagaaagttacatgtcttgtcacagat
gcggctgcaaacatggttgcatgtgtcaaaaagctccaaatcaggcacacgatttgcata
gcgcattctttgaatttaacagttcgaaaatcatgtgaccaaattgagacgctcactgaa
atccgaaataaaacaaagcacattgtaacatactttagaaccagtactacagccaaagag
aagctggcacaagtccagctacagatgggaggaccagtgaagaaattaatcaatgaggtg
tcaactagatggaacagcacatatttaatgctggaacgcatggcggaacagaaggagtcg
gtgttggtatcactagcttctttaaaaagtgatatacctcagctcactacaaatgattat
aaaatcatagaggagacactccgtgtgcttgctccatttaatcaagcgacagtggagctg
tctgaggaaaaaagagtgtctggatcaaaggtaatcccaatgctcaaaatgttgcacctc
tcactgcaacgcaatgcattaaatgtaaccacggaaaccgcaattaatcttgtggaaaac
ctaaaaagaagactgctagaaactctgtgcaacctggagtcattgagtgtaatgacaatg
ccaacactgctggaccctcggttcaagaccatggcattcttaagtgcgtcaaaagccaat
gatgcagtgaaaagactaaaatcagagtgtgcagcagtaatgagaaacgctataccaaca
caaatggaagatgcccaagctggaccttcaactcaaccatctgattccaatccagatgac
aacctgtggcaccagctggacatagaagtcaaggagagcaaggccaattcaaatgtcacc
accgatgccattatcgaggtacaaagatacatctccgaagagaacacaccaagatcacag
gatccactacaatactggaaatcgcaaagactaaattatcctacgttgtacaaacttgca
atgacatttttatgtacgccgtcatcatcagtgccctgtgaaagggtgttctcaaaagca
ggagaaatggtttgtaagcggcgcaatcgccttggcccaaagatgttaacgcagctgatg
tttctaaataaaaatgtgtga
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