Cyprinodon tularosa (White Sands pupfish): 119772080
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Entry
119772080 CDS
T07496
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctul03009
]
119772080 (ddx10)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119772080 (ddx10)
Ribosome biogenesis [BR:
ctul03009
]
Eukaryotic type
90S particles
Helicases
119772080 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
SecA_DEAD
PAS_11
AAA_22
Motif
Other DBs
NCBI-GeneID:
119772080
NCBI-ProteinID:
XP_038124297
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MKAGGSGKKKAGGPGAAAADPVRCFEKWKKKHTKTRALLKQQQKKKKKPQWQQEKEDIQR
LLSRYEDIRTEEVLKFSDLPLSRKTLLGLQEARYRQPTEIQRQTIGLALRGRDVLAAAKT
GSGKTLAFLVPVLESLYRQQWTPLDGLGALIISPTRELAYQTFEVLRRVGRNHEFSAGLV
IGGKDLKSESARICRTNIVICTPGRLLQHMDQTASFQASSLQVLVLDEADRILDMGFAET
LNAIVENLPATRQTLLFSATQTKSVKDLARLSLRDPEYVWVHEKARFSTPATLEQSYMVC
ELHHKVDMLYSFIRSHLRKKIIVFFACCKEVQYLYRAFCRLRPGTPVLALHGKQQQMKRV
EVYDSFVKKSSAVLFATDLAARGLDFPAVNWVVQFDCPEDANTYIHRVGRTARYQQGGEA
LLLLLPSEEAAVLAQLEEKKVPISRIQVNPDKLQSVQQKLEAFLAQEAELKERAQRCFVS
YLRSVYLMTNKEVFDVFKLKLQDYALSLGLAVAPRVRFLSKAREQRAQERLQNLQARPDG
EEDESPGDRSEDDEDLRDLDLLTVKRRDVFSETGAPEEAGPPTQGPKQPADKESRYREAK
KLLKRNFQINTKVTFNEEGEAVQLWPPAPQAAGQEEEEEQEGINVEKAKERLRREDQQFD
KLEYRRKVQAKHRERRMKAKEARREASRRRRSDQEQEAGAQLASHSEDEFDFSALPDPDP
SSEEEEEEAQRKRRKTEQQDEEQPGLDTGLTLAEDEELVLHLLAGRH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggaggcagcggtaagaagaaggcgggcggaccgggagcagcggctgctgac
ccggttcggtgcttcgagaagtggaagaagaagcacacgaagacccgcgcgctgctgaag
cagcagcagaagaagaagaagaagccgcagtggcagcaggagaaggaggacatccagcgg
ctgctcagcaggtatgaagacatcagaaccgaggaggttctcaagttctccgacctcccg
ctgtccaggaagacgctcctgggtctgcaggaggcccggtaccgccagcccacggagatc
cagaggcagaccatcggcctggctctgaggggcagagacgttctggctgcggccaagacc
ggttctggaaagaccctggccttcctggttccggtcctggagagcctgtaccggcagcag
tggacccctctggacgggctgggggctctgatcatctcccccaccagagagctggcctac
cagaccttcgaggttctccgcagggtgggtcggaaccacgagttctccgccgggctggtg
atcggggggaaggacctgaagagcgagtcggcccggatctgcagaaccaacatcgtgatc
tgcacgccgggccgcctgctgcagcacatggaccagacggccagcttccaggccagcagc
ctgcaggtgctggttctggacgaggcggaccggatcctggacatgggcttcgccgaaacc
ctcaacgccatcgtggagaacctgcccgccacccgccagaccctgcttttctccgccacg
cagaccaagagcgtgaaggacctggcccggctcagcctccgggacccggagtacgtgtgg
gtccatgagaaggcccggttcagcaccccggccaccctggagcagagctacatggtgtgt
gagctgcaccacaaggtggacatgctctactccttcatcaggagccacctgaggaagaag
atcatcgtgttcttcgcctgctgcaaggaggtgcagtacctgtaccgggccttctgccgc
ctgcggcccggcacgcccgtcctggcgctgcacggcaagcagcagcagatgaagagggtg
gaggtctacgacagcttcgtgaagaagagcagcgccgtgctgttcgccaccgacctcgcc
gccagaggcctggacttccccgccgtcaactgggtggtccagttcgactgtccggaggac
gccaacacctacatccacagagtgggccgcacggcccggtaccagcagggaggggaggct
ctgctcctgctgctgccctccgaggaggcggccgtgctggcccagctggaggagaagaag
gttcccatcagccgcatccaggtgaacccagacaagctgcagagcgtgcagcagaagctg
gaggccttcctggcccaggaggcggagcttaaggagcgggcccagcgctgtttcgtctcc
tacctgcgctccgtctacctgatgaccaacaaagaggtctttgacgtcttcaagctgaag
ctccaggactacgctctgtccctgggactggccgtggcccccagggtccggttcctcagc
aaagcccgggagcagagggcccaagaacgtctgcagaaccttcaggcccggccggacggc
gaggaggacgaatccccgggagaccgcagcgaggatgacgaggatctgagggacctggat
ctgctgactgtcaagaggagggatgtgttcagtgagacaggggcccctgaggaggcgggg
ccccccacccaggggcccaagcagcccgcggacaaagagagccggtaccgggaggccaag
aagctcctgaagagaaacttccagatcaacaccaaggtgaccttcaacgaggaaggagag
gcggtgcagctgtggcccccggcgccacaggcggcgggacaggaggaggaggaggagcag
gagggcatcaacgtggagaaggccaaggagaggctgagacgggaggaccagcagttcgac
aagctggagtaccgacgcaaggtccaggccaaacaccgagagaggaggatgaaggccaag
gaggcgcgcagggaggccagcaggaggaggaggtccgaccaggagcaggaggccggagcc
cagctggccagtcacagcgaggacgagttcgacttcagcgccctgcctgaccccgaccct
tcatcagaagaggaggaggaggaggcgcagaggaagaggaggaagactgagcagcaggat
gaagagcagccaggcctggataccggcctgaccctggctgaggatgaggagctggtcctt
catctgctggctggacgccactag
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