| Entry |
|
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| Symbol |
frem1a
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| Name |
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
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| KO |
| K23380 | FRAS1-related extracelluar matrix protein 1/2 |
|
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| Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ctul00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119772145 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:ctul04091]
119772145 (frem1a)
Lectins [BR:ctul04091]
C-Type lectins
Lecticans
119772145 (frem1a)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
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| LinkDB |
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| Position |
Unknown
|
|---|
| AA seq |
2183 aa
MGPQGRTLALTLLVGLLCLLTCSSDGSLVKVNKGLKVKRGQSVYLQEGDLQFHIPVQKDV
CKVEVVPNEPITQRVGRLVPQVFDCHYLSDEVKYVHNGCPLLKDDTVKLRLYRFTETETH
MEVFTLHVDIIAPECNIIKMGPKSLQVSEFYGLSDAIDGNVVSFHYERRSSLECSVQLRP
QESHLPAHGRLVTGDPERATKRGDEPESFIHLQQQLDNKARAMCKSEHCLKGLKLVTFTK
VPCDDFLLMGLKYQHIDPPSPDIDYIVIRLDLKDTRSGSIYQSEQAWLPVRIVGAMPNQP
PKPSFMSMFILEVDQFILTPLSTATLDAEDEETPKQLLVFNVTNPPKEGFITHLSDHTHP
ISSFTWLDLNDMLIAYQPPNSSHSQRRNYEVELEVYDFFFEKSSSITVHTSVRNADTNAP
RVSWNMGLSLLEGQSRPITWDQLQIVDNDNLNVVRVITVDGLLHGHLTVRGGKGFMFTIN
DIKAGVVCYHHDDSDSTKDFVIFRITDGRHQTRHKFPIKILPKDDSPPFLITNMLVEVLE
GQTTLLRGSTLKASDMDSSDDYILFNITRLPQAGEVMKIPGPGLAGYPVSRFLQKDLSQS
IVYYRHLGNEVFDDSFEVVLSDFHDPPNLSEPQVVVVHIASVPDQPPKEVPGSRRCLVVK
ETEIAHITRQQLHFADPESPDSELTYTVTTPPFFSGHYSSGSDAGRLFLVDSIPKFTKDS
NAPVLRLFTQHAVNFMKVAYMPPIMDIGPHPQYIQFILSVTNHLGKTVTGICFNITLMPV
DNQPPKVIANLLTVDEGGESLLGPEHLQVSDVDSLPEALRVELQRGPEHGVLHVGGHPLT
PGQNFTLQDLISRRVRYNHDSSETTEDTIELRATDGTNSVSFALPVKVIPINDELPVMVT
GLNPVLRCPEGEQIVITSEYIFATDVDSDNRSLAFLIARLPYHGVVLRNGVIVDRFIQAD
ITAGIIAYRHTGLEIGLTPRHDTITFVISDGENETSALCCGRETPTRGRSKTPQTRDSLP
VYDLHITVFPVDSQPPSLETGEIFKVDEGGTAQITAAHLRASDMDTVLDQLVVSLISPPQ
FGYIENVLPSPGFEKSNTGISIASFLYKDITKGYINYVQSRHLGIEPTADQFMLCVSDGK
RSSANIPFYIIINPTNDEIPEFMVQNITVQEGEMKHLDTSVFHAMDLDIPKNTLLFSVVR
PPQHGSIIHHSDGNPIIKRQEPDLWPSVAAFTMKDVKKGLDLMYLHDDSENMMDSFIIQL
TDGKHQLERRVMVEVLPVNDEEPHLIRNNGLEVKPGEARVISSVTLFAEDKDTPSTEIMY
IFESVPTQGILQLQEGQNWVTLTAGRRCTQDMVDMNLLRYIHTGHHATKTQDFFVFHLMD
GKNQSPPQHFQISVRDLEKGNIAIFVKPVNVSRGDRVVLTTDVLLATDDTDKPEELLYVI
TSPPAHGHIEYIKHPGVIISTFSQMDIAANLVAYVHDNRGEKATEKFQFVVSNGKTSRHG
SLELHVEMVDRVLPSLTSNKGLQVPQGSTMILGPDCLSLSDPDTPPGALTFSLHQPPQYG
TLLLAGVTLTAGSNFSMKHIKELEVTYRHDGGPSQIDRFAFTASDTSRRGFLLDGKLQTE
PVFFTIQIKPLDKSSPEVMKLLPLWKAELLPDGRYGIFLTSRELKAQDRDSREEELIFWI
VRSPYFGYLENITTGRFVPQRFSQSELSRRTIAYIISPDREILSDSLEFKVSDPLGNMGP
SHILQFQWSRVDFSQSESSSCEEQGKISLDIIRSGNLVESSYVTVKVIEGTATAEKDFRT
SLSSLIQFDPGVTKRTWQTDIVEDHIEEADEHFEVLLVSPEATVIGSISKAKLTIRDPGK
GECRPKQDQQAPLLGGKEIQPDTYPQHGSIRLEKLPLSKESVIWPRGDSISTQGEHLQRK
KLRVVNNPKSISPSTVFHNGTDVVYTYHGIMQMRVEDDASSRMSRRANIRVVSRGSQPQR
PGLTTDADSPREGRIQVKMGQARGNASTIISVAKACVPELMGLLHFNQSTNQLLHCNGVS
WKPWAPTDQLVGARMCPQGWTFQGGRCFILSTEHKLTWSAANRACRERFKGNLASVLSKA
DMNWLWDFSGRKPFWIGLSNGKGGGLWEWAGGEPVSYTNWKKAPPRSRMKGNRKCVLVWR
RAKWQIRDCKSGKGHRFVCSVKL |
|---|
| NT seq |
6552 nt +upstreamnt +downstreamnt
atgggtccccaaggtcgcactctggccttgactttgcttgtcgggcttctgtgtttgctg
acctgctcatctgatggttccctggtgaaagtcaataagggcttaaaggtgaaacgaggt
cagtcagtctacctccaggaaggtgacctgcaattccacattcccgtccagaaggatgtc
tgcaaggtggaggtagtgccaaacgagcccataactcaacgagtgggaagacttgtgcct
caggtgtttgactgccattatctgtctgatgaagtaaagtatgtccacaatggctgtccg
ttgttaaaggacgataccgtcaagcttcgcctatacaggttcacagagacagagacacac
atggaggtgtttactctccatgtggacattatagcgcctgaatgcaacatcattaagatg
ggtcctaaatccctccaggtctctgagttctacggcctctctgatgctattgatggtaac
gtggtttcctttcactatgaaaggagatccagtctggaatgtagcgtccagcttagaccc
caggaatcccaccttccagctcacggccggctggtcactggagacccagaaagagccacc
aagagaggcgacgagccagaaagtttcatccacttacagcagcagctagataataaagca
agagcaatgtgtaaatctgaacactgcctaaagggtctgaagctagtgacgttcactaaa
gtcccatgtgatgacttcctcctgatgggattaaagtaccaacacatagatcccccgtct
ccagatatagactacattgtaatcagacttgacctcaaggacaccaggagtggcagcata
tatcagtctgagcaggcctggcttccggtccggatagttggcgcaatgcccaaccagcct
cccaaaccatctttcatgtccatgtttatcttggaggtagaccagttcattctcacgccc
ctctccactgccacattggacgctgaagatgaggaaactccaaaacagcttctggttttt
aacgtcacaaacccccccaaggaaggctttatcacccacctatctgatcacactcatccc
atctcatcctttacatggctcgatctgaatgacatgctcatagcatatcaacctccgaat
tcttcacattcccaacgaaggaattatgaggtagaattggaggtttatgatttcttcttt
gagaagagctcatccataactgtccacacatctgtaaggaatgcagatacaaatgcacca
agagtgtcctggaacatgggtcttagtctgctggagggtcagtctcgtccgataacgtgg
gaccaattgcaaatcgtggataatgacaatctgaatgtagttcgagtcatcactgtggat
ggcctcctgcatggacacctaactgtaagaggtggaaagggtttcatgttcaccatcaat
gacataaaagcaggagttgtctgttatcaccatgatgacagcgactccacaaaggacttt
gtcatttttcgcatcaccgatggccgccatcagacccgacacaagtttcccatcaaaatt
ctccccaaagatgacagccctccgttccttataaccaacatgctggtggaggtcttggag
ggccagaccaccctgctcagaggctccaccctcaaggcttcagacatggactctagtgat
gactatatcctctttaatatcactcgcctcccgcaggcaggagaggtcatgaaaatccca
ggaccagggctggcagggtaccccgtgagccgcttccttcagaaggacctttcccagtcc
attgtgtactacagacaccttgggaacgaggtgtttgatgactcatttgaggttgttctg
tctgatttccatgatccccctaacctttcagaacctcaggtggtcgtggttcacatagcc
tctgttccagaccaaccaccaaaggaggttcctggttccaggcgttgtcttgtggttaaa
gaaacagaaatagcccacatcacacggcaacagcttcactttgccgacccagagtcgcca
gacagcgagctcacttacacagttacaactccacctttcttctctggtcactacagcagc
ggttcagatgcgggaaggttattcttggttgacagcatacccaaatttaccaaagattct
aatgcaccagtcctcagactcttcacacaacatgcagtgaactttatgaaagtagcctac
atgcctccaatcatggacatcggccctcaccctcagtatatccagtttattctgtctgtg
accaaccatctgggaaaaacagtcactgggatctgctttaatatcactctaatgccagtg
gacaatcagccaccaaaggttatcgccaaccttctgactgtagatgagggaggggagtcc
ttgctgggcccagaacacttgcaggtgtcagatgttgactctctgccagaagcattgcgg
gttgagctccaaaggggaccagagcatggcgttctgcacgttggtggccatccactgaca
ccaggccagaactttacactacaggacctgatcagtcggagggttaggtacaatcacgac
agctcagaaactacagaagacaccattgagttgagagcaacagatggaactaattcagtc
agtttcgctctgcccgtaaaggtcatacctatcaacgatgagctcccggtgatggttact
ggtttgaacccagttctcaggtgtccggaaggagaacaaatagtaatcacttcagagtac
atctttgccactgatgtggacagcgataacagaagccttgccttcctgattgcccggctg
ccctaccatggggtggttctgcgaaatggtgttattgtagatcgcttcatccaagcagac
attactgcaggaatcattgcgtacagacacacagggctggagattggattaactcctcga
catgacactatcacgtttgtcatctctgatggggaaaatgagacatccgctttgtgctgt
ggcagggaaactcccaccagaggcagaagcaagactcctcagacacgggacagcttgcct
gtctacgacctccatatcacagtgtttcctgttgacagtcagccaccctcactggaaaca
ggtgagatctttaaggtggatgaaggtgggacggcccagataactgctgcccatttaagg
gcctctgacatggatacagtcctagaccagcttgttgttagtttgatctctcctccccag
tttggctacatagaaaatgtcctccccagccctggctttgagaaaagcaacacaggcata
agcatagcttcttttctatacaaggacatcaccaagggttatattaactatgtacagtcc
agacacctggggattgaacccactgctgaccagttcatgctttgtgtctcggatggcaag
cgcagctctgctaacatccctttctacattataattaacccaacaaatgacgaaattcct
gaatttatggtacaaaacatcacggtacaagaaggagaaatgaaacacctggacacatct
gtgtttcatgcgatggacctagacatccccaagaataccctgctcttctctgtggtcaga
cctcctcagcatggaagcatcatccatcacagcgatggaaacccaatcataaagagacag
gagcctgacctatggccttctgtggctgcctttactatgaaagatgtcaaaaagggtttg
gatctgatgtatctccatgatgacagtgaaaacatgatggacagttttatcattcagttg
actgatggcaaacatcagctagagagacgggtgatggtggaagttctaccagtgaatgac
gaagaacctcatcttatcaggaacaatgggcttgaggtgaaaccgggagaagctagggtt
atatccagcgttacattgtttgctgaggacaaagataccccctctacagaaatcatgtac
atttttgagagcgttccaacacaaggaatactacaactacaggaaggccagaattgggtg
acacttacagctgggagaaggtgtacccaggacatggttgacatgaaccttttgcgttat
atacacactggccatcatgccactaaaacacaggacttctttgttttccacttgatggat
ggaaagaatcagtcaccaccacagcacttccagatttctgtcagagatctggaaaaagga
aacattgccatctttgtgaagccggtaaatgtcagccgaggagaccgtgtggttcttacc
accgatgtgctgctggccacagatgacacagacaagccagaggagcttctatacgttatc
accagcccacctgctcacggacacatagagtacatcaaacatccaggggtgattatatcc
accttcagccaaatggacatagcagcaaaccttgttgcttacgtccacgacaacagagga
gaaaaggcaacagaaaagtttcagtttgttgtaagcaatggtaagactagtcgacatgga
agcttagagctgcatgtggaaatggtggatcgtgttctgccatcactgacgtccaacaaa
ggcctccaggtccctcagggttccaccatgatccttggcccagactgtctctctctgtcg
gatcctgacactccacctggtgccctgaccttttctctccaccagcctccgcagtatggg
actcttcttttagctggtgttacactgactgctggctcaaacttttcgatgaaacacatc
aaggagctggaggtgacatacagacatgacgggggaccgtctcagatcgaccggtttgct
ttcacggcctctgacacatccagacgaggttttttgttagatggaaagctgcaaacggag
ccagtgtttttcaccattcagatcaagcctttagataaatcttctccagaagtaatgaag
ctactcccactttggaaagcagagcttttacccgatggcagatatgggattttcctgaca
tctcgagagcttaaggctcaggacagagacagcagagaagaagagctcatattttggata
gttcgttcaccttattttggctaccttgaaaacattaccacaggcagatttgtgccacag
cgcttctcgcagtctgagctcagcagaaggacaattgcttatatcatcagtccagatagg
gagattctctcagacagcctggagttcaaggtgtctgatcctttaggtaacatggggccc
tctcacatacttcaattccagtggagcagagtggatttttctcagtctgagtcctcctca
tgtgaggagcagggaaaaatttctctggacatcattcgaagtgggaacctagtcgagtca
tcttacgtcactgtcaaggtgattgagggcaccgcaactgcagaaaaagacttccgtacg
agcctctcttcgctgattcagttcgatccaggagtaacaaagcggacttggcagactgat
atcgttgaggaccacattgaggaggcagatgaacatttcgaggtgctgcttgtttctcct
gaagctacggtcattggtagcatcagcaaggctaaacttacaatcagagacccgggaaaa
ggagagtgcagaccaaagcaggaccaacaagctcctcttctgggaggaaaagagattcaa
cccgacacgtatccccagcatgggtccatccgtttggagaaacttcccctcagtaaagaa
tcggttatatggcccagaggagacagcatctctacccaaggagaacatctccagaggaag
aaactcagagttgtcaacaatcccaaatctatttccccttcaacagtgttccacaatggg
acagatgtagtttacacatatcatggaatcatgcaaatgcgagtagaggatgatgcatca
tctaggatgagcaggagggcaaacatccgagtggttagcaggggttcacagccacagcga
cctggacttactactgacgccgactctccaagagaaggaaggattcaagttaagatggga
caagctcgaggaaatgcatccaccatcatctctgtagccaaggcatgcgtgccggagctg
atgggactcctgcatttcaaccagtccaccaatcaacttcttcattgcaatggcgtctcc
tggaaaccctgggcaccaactgaccagctggttggtgccaggatgtgtcctcagggatgg
acttttcaaggaggacgttgttttattctcagcactgagcacaagctgacatggagtgca
gcaaacagggcctgcagagaaaggtttaaaggaaatcttgcaagcgttttgtctaaagct
gacatgaactggttgtgggacttcagtggaagaaagcctttctggataggtctgagcaac
ggaaagggtggaggactgtgggagtgggcgggcggcgaacccgtcagctacacgaactgg
aaaaaggcgcctccccgctcgagaatgaaaggcaaccggaagtgtgtgctggtgtggaga
agagccaagtggcaaatcagagattgcaagagcggcaaaggccatcgctttgtttgctca
gtgaaactctaa |
|---|
