Cyprinodon tularosa (White Sands pupfish): 119772389
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Entry
119772389 CDS
T07496
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119772389 (chd2)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119772389 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
119772389
NCBI-ProteinID:
XP_038124718
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MMKNKNKKEDEGSTQSNASSNSASEESNHSASESGSQSESEHGSVRRRSHNSESNSSSES
ESRSESGSESTESKSQQAASEAKDKPVRKKERLADVKKMWEEHPDVYGVRRSNRSRQEPA
RLNIGAEGSSDSESESPKRKSSRSKKKENIWKDDDSIDEEEEDEETSDSSDSEQEEKKVR
SRRLPARRPQTKASKKQQSQKGRRSRKPESSAEDDDEDDDEDDDDDDEEDTPKRQTRRRG
ATKIKSYKEDQHDFETDSDDLIEMTGDAGEEQQDDDSETIEKVIDCRIGRKGATGASTTM
YAVEENGDPCEGFDPDQDEGETQYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLDNFKK
KNDELNAWLGKASPEDVEFHNCQQELTSDLTKQFQIVERVIATKTGKTPGSSDFPSHSHK
TPSSNEPEYLCKWMGFPYSECSWEDGALVRKKFQHCIDGFMSRNSSKTIPSKDCKVLKQR
PRFVALKKQPSYIGDEILQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLS
YLFHQHQLYGPFLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKTIRDYEWVNHQT
KRIRFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKSLMEFRSNHRLLI
TGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKD
VEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNH
SFLIRQPEEAESETQQECLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILA
EYLTKRRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI
FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMD
TTGRTVLDNNSGNSNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAET
RETDQGSSATDELLSQFKVANFSSMEETTPEFDERPVREWDDIIPEEQRRKIEEEEKQRE
MEDIFMLPRSRSSNKRAQANDSDSDVGSKLKQRSSGSDSETDDSDDDKKPKKRGRPRARK
NNVEGFTDVEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELIHSSCVTAV
QEHEEQLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKVVPSNPAERNK
FKLTCRVKVAHFDVEWDLQDDTQLLLGIYEHGFGNWDLMKTDPDLQLADKILPDDPNKKP
QGKQLQARAEYLLKLLKKEQDNTSVSKAGDEVKVKKRKPRVKKEAKVLKDEQGNEISSPR
LSDNPSEEGEVKEEGAEKSPVKKRQKKKDNKENKEKQGTPKKDGDKEKKTAKPRKEKAKR
AKGKKTQGPVHITAGSEPVPIEGKEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSD
QDQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFVSKFTEFSARKLHKLYKMA
QKKRSHDEEKEHKKKEDPSGRIKSFRPEPSSSSRDSTGTPSSKPAPPPSQSGPHGHHREP
YNSANKRHFSNNDRGDWPRDRKYGYQGNSNQPWQGDRHHPYDPHRYNKDHYGDRRPHGDT
YRSSGGYRNNTSPRKRPYDQYGNDRDHRGHRPYYDRHPDPKRRRPDDFHPSYHQGRDGPS
HDFRRMPDHRPPGPSGPEHYNRPFHPDKPPPLLDPRSPQAQKSPQDSRSPLERPMDPGIM
ADPNWNSRKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataaaaataaaaaagaggacgaaggatcaactcagagcaacgcttcaagc
aattcagcctcagaggagtccaaccactctgcgtcggaatcagggagtcagtcagaaagc
gagcatggcagcgtgaggcggagatcccacaactctgagtcgaacagctcctccgagtca
gagagtcgctccgagtcggggagcgagtccacagagtccaaatcccagcaagccgcttca
gaggccaaagacaaacctgtcaggaagaaggagcgcctggctgatgtgaagaagatgtgg
gaagaacacccagatgtgtacggtgtcaggaggtccaatcgcagcagacaggagccagct
cgtctcaacatcggagctgagggcagcagtgactctgagagcgagagccctaaaagaaaa
tcttctcgatcaaagaaaaaggaaaatatctggaaagatgatgactcaattgatgaagag
gaggaggatgaggagacatccgacagttcagacagtgagcaggaagagaaaaaagttaga
tccagaagacttcctgctagaagacctcagaccaaagcatccaaaaagcagcagtcgcaa
aaaggacggaggtcgagaaaaccggagtcctcagctgaggatgatgatgaggacgatgat
gaagatgatgatgacgatgatgaggaagacactccaaaaaggcagactcgccgaagagga
gccacaaaaattaaaagctataaagaagatcagcacgactttgaaacagactcagacgac
ctgattgaaatgaccggagatgctggagaggagcagcaggacgacgacagcgagacaatc
gagaaagttatcgactgcaggatcggcagaaaaggagccaccggagcgtccaccactatg
tacgccgtggaggaaaacggagatccgtgtgaaggttttgatccagaccaagacgaagga
gagactcagtatctgataaagtggaagggctggtcttacatccacaacacatgggagagc
atcgactccctaacgcagcagaaggtcaaggggctgaagaaactggacaactttaagaag
aagaatgatgagctgaatgcttggttaggtaaagcatctcctgaggacgtggagtttcat
aactgccagcaggagctcacatctgacctgacaaagcagtttcaaattgtggagcgagtc
atcgcaacaaaaacaggaaagacaccgggttcctcagattttccctcacacagtcataag
accccatcctcgaatgaaccagagtatctatgcaagtggatgggtttcccatactcggag
tgcagctgggaggacggggctttggtcaggaagaagttccaacactgcatcgacggcttc
atgagcagaaactccagtaaaaccatcccttctaaagactgcaaggtgttaaagcaaagg
ccgaggttcgtggcattaaagaaacagccgtcgtatatcggtgacgagatccttcagctc
agagattaccagctggatggattgaactggctcgcccactcctggtgcaggtgcaacagt
gttatcctggctgacgagatgggcctggggaagaccatccagaccatctccttcctttcc
tacttgttccaccagcatcagctctacgggccgtttttagtggtggtccctctgtccaca
ctgacctcctggcagagagagtttgacacctgggctccagacatgaacgtggtggtctat
ttgggtgacgtcatgagcaggaagacgatccgtgactatgaatgggtgaaccatcaaacc
aaaagaatccgcttcaatgcgctcttaaccacatatgagattctgctaaaggataagggc
gtcctcgggaatatcaactgggcctttttgggcgtggatgaagctcataggctgaaaaat
gatgattctctgctctacaagtcgttaatggagttcagatccaaccaccgactcctcatt
acgggcaccccgctgcagaactccctcaaagagctctggtccttgctacacttcctcatg
cccgacaagtttgattcctgggaggattttgaggatgaacacggaaaaggaagggataac
ggttatcagagtcttcataaagtcctggagccattcctgctccgaagggtcaagaaagac
gtggagaagtctctccctgccaaggtggagcaaatccttcgcgttgacatgtctgcacag
cagaagcagttctacaagtggattttaacaagaaattacaaagccctttccaaaggcacc
cgcggcagctccagcggcttcttaaacatcgtgatggagcttaaaaagtgctgcaaccat
agtttcctcattaggcagcctgaggaggcagagagtgaaacgcagcaggaatgcctgcag
gctttagtgagaggcagtgggaagctggttctgcttgacaagctgctgacccgactccgg
gaaagaggcaacagagtccttatcttctcccaaatggtcaggatgttggacatattggcc
gagtatctcacgaagaggcgatatcctttccagcgtctggatggttccataaagggagaa
atccgaaagcaagcgctcgaccacttcaatgctgagggctcagaggacttctgcttcctg
ctatccaccagagccggaggtttaggtattaatttggcctcagcagatactgttgttata
ttcgactcagactggaaccctcagaacgacctgcaggcgcaggccagagcccataggatc
ggacagaaaaagcaggtgaatatatatcggcttgtcaccaaaggaaccgtggaggaggac
atcatcgagagggcaaagaagaagatggttttagaccatctggtcattcagagaatggac
accacagggcgaacggttctggacaacaactcaggaaactcaaattcaaacccttttaat
aaagaggaacttacagctattcttaaatttggggctgaagatctgttcaaagaggccgag
ggagaggaatctgaaccacaggagatggatattgatgagatcttgaggttggctgaaaca
agagaaaccgatcaaggctccagcgccacagatgagcttctatctcagttcaaggtggct
aacttctctagtatggaagaaactactccagagtttgatgagaggccggtccgagaatgg
gacgacatcattcccgaagagcagcggcgcaaaatcgaggaggaggagaagcagcgagag
atggaggacatctttatgctgccccggagcaggagctccaacaagagggctcaagccaat
gacagcgacagcgacgtgggctcgaagctgaagcagcgttcgtccggctcagacagtgag
acggatgatagtgacgacgacaagaagccaaagaaaagaggcagacctcgagctcgtaaa
aacaacgtggagggtttcacagatgtagaaattcgcaggttcattaaggcatacaagaag
tttggagctcctttggaaaggttggaggcaatcgcccgagactcggagcttgtggacaaa
tcgattgcagacctgaagaggctgggggaactgattcactccagctgtgtgacagcagtt
caggaacatgaagagcagctcaaagagaatcccgtcgaagctaaaggtcctgggaaacgc
agaggaatcaacattaagatatcaggagtccaggtcaacgccaagtcgatcattcagcat
gaggaggagtttgagccgcttcacaaagtggtgccctccaaccctgctgagcggaacaag
tttaagcttacatgcagagtgaaagttgcccactttgatgtggaatgggatctgcaggat
gacactcagctcctcctcggcatctatgagcacggctttgggaactgggacctgatgaag
acggatcccgaccttcagctggctgataagattcttccagacgacccaaacaagaagcct
cagggcaaacagctgcaggcgagagcggagtatctgctgaagctgctgaaaaaagagcaa
gacaacacctctgtgtccaaagcaggagacgaggttaaagtgaagaagaggaagccccga
gttaagaaggaagcgaaggttctgaaagacgaacagggcaacgagatctcgtctccgcgg
ctgtccgataatccgtcagaggaaggagaggttaaggaagagggagcggagaagtctcct
gtgaagaagagacaaaagaagaaagataacaaggagaacaaagaaaaacagggaacacct
aaaaaagatggagacaaggagaagaagaccgccaagcccagaaaggagaaggctaaaaga
gccaaaggaaagaaaacccaaggtccggttcacatcacagccggttctgagcctgttccc
atcgaaggaaaggaggacgatgaacttgaccaggaaacctttagcatttgtaaggagcgc
atgaggcccgtgaaaaaggccctaaagcagctggacaaacccgatgaaggtctgtccgac
caggaccagctccagcacacgcgcacatgcctgctgaagatcggagaccgaatcactgag
tgccttaaagcgtacagcgaccccgagcatgttaagatatggcgcaggaatctctggatt
tttgtgtcaaagtttacagagtttagtgccagaaagctccacaagctttacaaaatggct
cagaaaaagcgatcgcatgatgaagagaaggagcacaagaagaaggaggacccctcaggg
aggataaaatccttcagaccagaaccttcgagttccagcagagactccacaggtaccccg
tcctccaaacctgcacctcccccgagtcagtcaggaccccatggacaccacagggagccg
tacaattctgctaacaaacgacacttcagcaacaatgatcgaggagactggccgagggac
cgtaaatacggctaccaaggaaacagtaaccagccctggcagggagaccgccaccatccc
tacgaccctcatcgctacaacaaggatcactatggagatcggcgtccgcacggagacacg
tatcgcagctcaggcgggtaccgcaacaacacctctcctcggaaaaggccgtatgaccaa
tacggcaacgacagggaccacaggggtcaccggccctattatgacaggcatccggacccc
aaacgaagacgccctgatgattttcatcccagctaccaccagggacgggacggcccttcg
catgacttcagaaggatgccggaccacagaccgccaggtccatcggggccggagcattac
aaccggccgttccaccccgacaagcctcctcctctgctggacccccgctcccctcaggct
cagaagtctccccaggactcccgctccccgctggagcgtcccatggatcccggcattatg
gcggaccccaactggaacagcaggaaaacataa
DBGET
integrated database retrieval system
