Cyprinodon tularosa (White Sands pupfish): 119772586
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Entry
119772586 CDS
T07496
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119772586
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119772586
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119772586
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119772586
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Protocadherins
119772586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6899
TM_ErbB1
CD34_antigen
FAM176
Motif
Other DBs
NCBI-GeneID:
119772586
NCBI-ProteinID:
XP_038124967
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MLRSRHPSKKGRIWGFYILMLYTSPLSCLANFSQAKELIYTIKEGLPKGTFIGAIGEDLR
LDFTVEPPFSFSLTQKKVTEQYVNINNTTGELYTSAAEIDRETLCPYSSDKQGCFFSLDV
FVLPQQYFQLVKVKLLIEDVNDNRPKFPMDEICMFVPENAQINSRFAVEQSAVDPDLGIF
GVQTYWLVNDFGVFTLDVEENDGGELTPFLIITDFLDRETQDEYITDIIAEDGGTPPLLG
AATLKIAITDVNDNCPKFTESQINVTLHGNTSKGTHLARLHAFDPDLGTNAEISYAYSER
VPRDTRSLFHLDKITGGIKLARKIDSATATFYKLTVLANGPGCIPAVATVSVHVIKLVTG
PPDILPRYIASEKDGVVTLKESEPAFSPIAFFTIKNMDKTHRVDCYLEGNGPFRLVPYQQ
LENEYLLETTDTLDYERIQEYELIVVANKTLGMVIKTFLKVQVLDENDNAPVFQQSLVEI
SIEENNSPNTFLTQLQASDPDSEGRGEVIYILGGDAPGIFAVDRLTGVLTVATSLDREEK
EKYRFIVRAVDQGTPRRESLATVVVTVLDRNDNSPRFINKDFTFFVPENFPGFGEIGVLS
VTDADAGKNGWVALSILNGSDIFMIDTGRGALRAKTPLDREQQGTYQLWIEAADGGVPAL
SSITMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPSTAPGTSIAEVYAVDKDTGMNAVIAY
SIIKRKGGEPGSFAIDPQTGNITLMRELSNRGLYSLLVKVTDHGQPEPLYSTVIVNFFVN
ETVSNESYIQSLLTRDTDIEVEEKPWYGGQMTDGPERYELFPCRSVLIALSVVCLGLFFL
VVILISYICCKRFKKIRHKRSEVEAPLKMKNGSTHDLNRKLRQMSKM
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggagtaggcaccccagcaaaaaaggaaggatatggggtttttacatcctcatg
ctgtacacctcccccctctcctgtttggcaaatttcagtcaagcaaaagagctcatctat
acaataaaggagggattacccaaagggactttcattggagctattggagaagacttacgt
ttggattttacagttgagccccccttttccttcagtctcactcaaaagaaggtcacggag
cagtatgtaaacataaataatactactggggagctttacacatctgccgctgagattgac
agggagaccctctgtccttacagctcagacaagcagggatgcttcttttcactggatgtg
tttgtgttacctcagcagtactttcagcttgtcaaagtaaagcttttgattgaagatgtg
aacgacaacaggccaaagttccccatggatgaaatctgcatgtttgtcccagaaaacgca
caaataaattcacgttttgcagtggagcaatcagctgttgacccagacctgggaatcttt
ggggtccagacctactggctggttaatgactttggtgtgttcactctggatgttgaggag
aatgatggaggtgagctgacaccattcctcattataacagactttttggacagagagacg
caagatgaatacatcacagatatcattgctgaagacggagggacccctcctctacttgga
gcagctactttaaaaattgccatcacagatgttaatgataactgtcctaaatttacagag
tctcaaattaatgttactctgcatgggaatacaagcaaaggcacacatttggcacgtttg
catgcttttgaccctgaccttggtactaatgcggagatcagctacgcttacagtgaacgt
gtgccaagggacaccagaagtttgttccatttggacaaaattacaggagggataaagcta
gccagaaaaatagactctgccacagccacattctacaaactcactgttctagccaatgga
cccggctgcatccctgcggttgcaactgtaagtgtccatgtcataaagttagttaccggc
ccccctgatatcctacctcggtacattgcatctgaaaaggatggagtggtgacactgaaa
gagtctgagccagctttttctccaatagcattctttactattaaaaacatggacaaaacc
cacagggtagactgttatttggaagggaatggtcccttcaggcttgtcccatatcagcag
ttagagaacgagtatttactagaaacaacagatactttggactatgagaggatacaggaa
tatgagctaatagtggttgctaacaaaactctgggtatggtcataaagactttcctaaag
gtgcaagttttggatgagaatgacaatgcaccagtgtttcaacagtctttggtggaaata
tcaattgaggaaaataattcacctaacacatttcttacccaacttcaagcctcagatcca
gacagtgaaggccgaggagaagtcatttacatccttggaggtgatgctcctgggattttt
gctgtggatcgtctcacaggggttctgactgttgctacatctcttgacagggaggaaaaa
gaaaaatatcggttcatagttagagcagtagatcaggggacgcccaggagagagtcactc
gcgacagtggtggtgactgtattagatcgtaacgacaacagtccacgttttattaataag
gattttaccttctttgtaccagaaaactttccagggtttggggagattggtgtcctctct
gtcacagatgctgatgctggtaaaaatggatgggtagccctttccatcctcaatggcagt
gatatcttcatgatagacactggccgcggtgcattgagggccaagactcctctggatcgt
gaacagcaaggaacataccaactttggattgaggctgctgatggtggggtgccagcactc
tcttctattacaatggtgacagtgctcttgttggatgtaaatgacaacccgccaattgtc
ctcttccctcagtccaaccagtcctacatgctagtgctacccagtacggcacctggaaca
tcaattgcagaagtatatgcagtggacaaagatacagggatgaatgcagtaattgcctac
agtatcattaaaaggaaaggtggtgagccagggtcattcgcaattgacccacaaacagga
aatataacattaatgcgagagctcagcaacagagggctttatagccttctggtgaaggtt
actgatcacggccagcctgaaccactttactcaactgtcatagttaacttctttgtcaat
gaaacagtgagtaacgagagttacatccaaagtcttttaaccagagacactgacatagaa
gttgaagaaaagccctggtacggtggacagatgactgatggtcctgagagatatgaactg
tttccctgtcgctctgtcctcattgctctttcagtggtatgtctggggttgttttttcta
gttgttatattgatatcatatatatgctgtaaaagattcaaaaagataagacacaaaaga
tcagaggtggaagcacctttaaaaatgaaaaatggctcaacacatgatttgaacagaaaa
ctcaggcagatgtctaaaatgtga
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