Cyprinodon tularosa (White Sands pupfish): 119772605
Help
Entry
119772605 CDS
T07496
Symbol
si:ch1073-15f12.3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04382
Cornified envelope formation
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
ctul04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119772605 (si:ch1073-15f12.3)
04518 Integrin signaling
119772605 (si:ch1073-15f12.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119772605 (si:ch1073-15f12.3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119772605 (si:ch1073-15f12.3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
CCDC18_1st
Nuf2_DHR10-like
APG6_N
CCDC170_1st
COG5_N
Tropomyosin
LAMB1
DUF745
NET2A_C
F5_F8_type_C
RPW8
DUF5847
Motif
Other DBs
NCBI-GeneID:
119772605
NCBI-ProteinID:
XP_038124992
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MIILVLLAAFTAISEAQNDCALGACYPPNKDLLLGRSDQLQASSTCGLTGSEVYCTPYQQ
RRMKCCPCDSRNPNGQLAHTIQDILTTSGPDRWWQSSKGVNPVTIQLDLNNLFQLDNLVL
SFKGPRPKAMVIERTLDNGRTWQPALYLAENCEQAFPGIQTTSPLSLDQTYCTRLQPHIN
PYQDETIEFSPLRQYTFAPVSNSQKIEDKSGFTGLRLTLTELGDVPRLPGRSLSKFFSLK
EMRVMGTCMCHGHADQCLPEEYVNPNSNTIQVNPTCDCKHNTAGVNCERCADFYNDLPWR
PAEEGNTHTCRRCDCNNHAQRCYFDPGVYEASGRRSGGVCEGCQHHTTGPKCERCAPGYQ
PNPRSRMDRPDACIRCICSAEGTVNGAQCEDSTGSCQCKANVEGPRCDRCKRGFYGLSSS
DPLGCKQCSCSPVGSLSVLCDPVTGMCPCRPHFHGLTCDECSEGYWRPPQSKRCEPCGCD
PTWSISDTCDPKTGRCECRAGFGGRTCTECADNTYGSPLSGCRPCQCDVDGTLPGVCDRK
TGACMCRPGVTGTRCDSCKREHCDSFPACELCPNCFFTLDSQRKNLSLALEKLASRGPSL
PGGTGDLGNLGPRIRALEASLNLIRDSVSQPSSTASQLDDALSQLDKLEDEINRVNDNLP
SPVRDPGLKSELDKIQALLDSLSLIYDAKAGGGGTDPSSTEALDAVKKAYDESTEAEKKV
DSTEDTVKQSSDIREEAEDLQGQVQPNNTRDLNKLKQNMATQPDLTPVAKQVCGSVRSEP
CTPLQCAGEALCPAEGHQACKDGIKCVGALPLSQKADADVMDVKDRLSNLSAKITEATQM
LQETQKETDQVKKLAKDLADDSKKARDELDEDLKKTRDVVKELKDFLSDPSSNLTKVQEV
SDFILKAKPPISRPELKEKLEELKKLAANLPSTVNVLEEAKPQLEAAKKLLQEAEEARDK
ALEAKDDVTELLEDLDSKKSSFPDLEGKLQDSMDLIQNLNKDLTQAEGQLTPAEKALDDT
GALMPPMKETVDRLKELLQDAEQKAPDALEDAGEAVEKAAAAEPDLKDLEDKVGQLKDKA
DTGGTGETDPVGDKLEKLQEKAVDLANTTQNMTDSLQGKADSLRRLQEEILQKSTKLEGL
DAKLQDILKTLRSKTEKLHSCQN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgataatcctcgtacttctagctgctttcactgcgatatcagaagcccagaatgactgc
gcccttggagcgtgttatccacctaacaaagacctcctcttgggcagatctgaccagctc
caagcctcctccacctgtggcctgactggctcagaggtctactgcactccataccagcag
cggaggatgaaatgctgcccatgtgactccaggaaccccaatggtcagctcgcccacacc
atccaagacatcctcaccacctctggaccggacaggtggtggcagtccagcaaaggggtg
aatccagtcactatccagttggacctcaataacttgttccagcttgacaacctggtgctc
agcttcaagggtcctcgccccaaagccatggtcatagagaggacactggacaacggtcgg
acatggcagcctgctctctacttggctgaaaactgtgagcaagcttttcctgggatccaa
accacctctcctctgagtcttgaccagacttactgcaccaggctgcaaccccatataaat
ccatatcaagacgaaacaattgagttcagcccattacgtcagtacacctttgcgccggtg
tctaacagccagaaaatagaagataagtccggcttcacgggactccgcctgacgctgact
gagttgggggatgtgcctcgtttaccgggcagatccctcagtaagttcttctccctaaag
gaaatgagagtgatgggcacctgcatgtgccatggacacgcggaccagtgcctgccagag
gaatatgttaacccaaactccaacaccatacaggtgaatcctacatgtgactgtaaacat
aacacagctggagtaaactgtgagcgctgtgccgacttctacaacgacctgccttggcga
cccgcggaagagggaaacacacacacctgcagacgctgtgactgtaacaaccacgcccag
cgctgttactttgacccaggggtgtatgaggccagtgggaggcggagtggaggagtgtgc
gagggttgccagcaccacaccacagggccaaagtgtgagcggtgtgccccaggctaccag
cccaacccccgcagccgaatggatcgtcccgatgcatgcattcgctgcatctgcagtgca
gaggggacggtgaacggcgcccagtgtgaagacagcacaggctcctgtcagtgcaaggct
aatgtggagggcccccgctgtgaccgctgcaagagaggtttctatggcctgagctcatcc
gaccctctgggctgcaaacagtgctcctgttctccagtcggctccctgtccgttttgtgt
gaccctgtgaccgggatgtgtccctgtcgcccccatttccatggcctgacctgtgacgag
tgttcagagggctactggagaccaccgcagtcaaagcgctgtgaaccctgtggctgtgac
cccacctggtcgatcagtgacacctgtgacccgaagacaggccggtgtgaatgcagagca
ggctttggaggaagaacatgcactgaatgcgcagacaacacatatggatcccctctgtct
gggtgccgaccttgtcagtgtgatgtagatgggacccttccaggagtttgtgacaggaag
accggagcgtgcatgtgccggccgggtgtcaccgggacacgctgtgactcgtgtaaacga
gagcactgcgactctttccctgcctgcgaactttgcccaaactgtttcttcaccctggac
tcccagcgaaagaacctcagcctcgctctggagaaactcgcttccaggggtccatctctt
cccggaggcaccggcgatcttggaaatctggggccacgcattcgggctcttgaggccagc
ctaaacttgatcagagactctgtgtcccaaccatccagcactgcctcccagcttgatgat
gccctgagccagctggacaaactggaggatgagataaatagagtgaatgataatcttcct
tctccagtgagagatcctggtttgaagtctgagctggataaaatacaagctctgctggat
agcctctctttgatttatgacgccaaggcaggaggaggcgggaccgaccccagcagcaca
gaagcacttgacgccgtcaagaaggcgtatgatgaatcgacagaagcagaaaagaaggtg
gattctactgaagacacggtgaagcaatccagtgacatcagagaggaggcagaggacctt
cagggccaagtgcagccgaacaacaccagagacctgaacaagctaaagcaaaacatggcc
acccaaccagacctgactcctgtggctaaacaggtgtgtggcagtgttcggtcagagccc
tgcacccctctgcagtgtgcaggggaagctttgtgtccagcagagggacaccaggcctgc
aaggacggaataaagtgtgttggcgctctaccattgagccaaaaggctgatgctgatgtg
atggatgtgaaggaccgactgagcaaccttagcgccaagatcacagaggctacccagatg
cttcaggagacacagaaggaaacagatcaggtgaaaaaattagcaaaggacctggctgat
gattctaagaaggccagggatgagctggacgaggacttaaagaaaacacgggacgttgtt
aaagagctcaaagactttctgtcagacccatcctccaacctgaccaaggtccaggaggtg
agtgacttcatcctgaaggccaagccgcccatcagtcggcccgagctgaaggaaaaactg
gaggagcttaaaaagctggctgcaaatttaccaagtaccgtaaatgttctggaggaggca
aaaccacagctggaagcagccaagaaactgctgcaggaggcagaggaggccagggacaag
gctctggaagccaaggatgacgtcactgaactcctggaggacttggattcaaagaaaagt
tccttccctgacttggagggaaaactgcaggacagcatggatctcatccagaacctgaac
aaagacctgacccaggctgaaggccagctgacgccagcagagaaagctctggacgatact
ggagcgctgatgccgccaatgaaggaaacggtagacagactgaaagagctgctgcaggac
gcagagcagaaggctcctgatgctctggaggacgcaggggaagccgtggaaaaggcagcc
gctgcagagccggatctgaaagatttggaggataaagttggtcaacttaaagacaaagca
gatactggagggactggagagacggaccctgtgggagataaactggagaaactgcaggag
aaagctgtagatctggccaacaccacgcagaatatgacagattccctgcaaggaaaagca
gactctctcagaagactccaggaagagatcctccagaagtctacgaagcttgagggactc
gatgccaagcttcaagacatcttgaaaactcttcgatctaaaacggagaagctgcacagc
tgtcagaattaa
DBGET
integrated database retrieval system
