Cyprinodon tularosa (White Sands pupfish): 119772657
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Entry
119772657 CDS
T07496
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119772657 (mms19)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119772657 (mms19)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119772657 (mms19)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
119772657 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
RTP1_C1
TOR1L1_N
HEAT_2
HEAT_ECM29
API5
TPR_Trm732
Motif
Other DBs
NCBI-GeneID:
119772657
NCBI-ProteinID:
XP_038125102
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MRSPRRNRGAMAAESPPPLLLSLVDEFVSGLQDSRSKDAAKGVKEGQFSVLQLVEALGQS
LTSTQPHTRARGVQLLSEVLQESYAELTEREVELLLAFYENRLKDHYVITPPVLRGLQAL
TKSRRLPPGAAVSMLKALFQDVHVQSLMLAERACVYNMLINLMESREDELKGLGADFVFG
FVQSMDGERDPRNLLLAFQIARNILLRGYNLGKFTEELFEVTSCYFPIDFSPPPNDPHGI
TKEELIQALRAVLTGTPKFAEFLLPLIIEKLDSDVQSAKVDALQTLAACVRQYEDKDLVD
FLEGLWSSLRREVFQTSSEKIESAALAALTALTSCLSRSVLKSDSEDSLSTFLDLVLKDC
KHHLFEPDLKLVWPSAKLLQAACSTSYRAGHHITAAVMPPLVEQYNSRTQCSHRRTLLEV
EQRFIQSAAASCQSVDQDESLFSAYKDSLCSMVFSALSESNSSLQITAASLLTSLAQQTG
LLSDSDIDLAVDHLTRLLLTDEDESVSLAVVECAGALAGRHPAAFIAKLIPTLKKEMFPD
QREASELRSHDAVRQRCLSALAAVSVQASVVQESAPVLLDVLSSVHADPSCFSTDEVVHA
CLSLQKIAERLQDDEETSRCFHDVVIPRLLSLALQAALQSEGSCGRRSPLVEEAVLSAMV
PVISAACSRPQTMFAEQTASRVVSLFLDGDVSFLPDNSLPSQVPLLQKKQQQEDEDSWRR
SQLVCLLMACVCSFPRSVEVPQEERLLSALKELSCSCSHPLSYTSAAKCFAGLLNKKPEG
TDLDGWIQRTVKRVSGELDRTSSSCRLQAFTLLIWVAKALLLRYHPSFSALTDKLFSLLH
DADLGPMAADGFSLLMSDSTDVLNRGYHADVRIMYRQRFFSENSAKLVQGFNAAPKEKKP
NFLKALSNIVNKLPKQVQVSELPALLSLLLEALTCPDQGVQLSTLSCLEPVLVTPPQVLI
QQLEALVSRLLALVGSPSMKIRIASIRCVLALSHLPSHEVLPFRARVLRALAPPLDDRKR
LVRREAVQARGEWFLLGSPGGR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtccccggaggaacagaggcgcgatggctgcagagagtcctccgccgctgctg
ctgtctctggtggatgaatttgtctccggtcttcaggacagcaggtcaaaggatgccgcc
aaaggtgtcaaggaaggacagttttcggtcctgcagctggtggaggcactggggcagagc
cttaccagtactcagccccacactcgagcccgaggcgtccagctgctgtctgaagtttta
caggagagctacgcagagctgacagagagagaagtggaactgctcctggccttctatgaa
aaccgcctgaaggaccattacgtcatcacgccgcctgttctacgagggcttcaagcgctt
accaagtccagaaggttgcctcctggtgcggcggtgtcgatgctgaaggctttgtttcag
gacgttcatgtacagtcgctgatgcttgcagagagagcgtgcgtctacaacatgctcatc
aacctcatggagagcagggaggatgaactgaagggtctgggcgcagatttcgtgtttggt
ttcgtccaatcgatggatggggagagggatccccgcaacctgctgttagccttccagatt
gccaggaacatccttctgcggggatacaaccttggtaaattcacggaggagctgttcgaa
gtgacgtcctgctacttccccatagatttctccccacctcccaatgaccctcacggcatc
accaaggaggaactcatccaggcactgagggccgtcctcaccgggacccccaaattcgca
gagttcctgctgcccctcatcatcgagaagctggactcggacgttcagagtgccaaagtg
gacgcgctgcagactctggctgcctgtgtgagacagtatgaagacaaggacctggtggat
ttcctggaaggactctggagctcgctgcgcagagaggtgttccagacatccagcgagaag
atcgagtcggcggccctggctgctctcaccgcgctcacttcctgtctgtcccgctctgtc
ctcaagtctgactctgaagactcgctcagcaccttcctggacctcgtgctcaaagactgt
aagcaccacctgttcgagcccgacttgaagctggtttggcccagcgccaagctgctccag
gccgcctgcagcacctcctacagggcaggtcaccatataacagccgctgtcatgcctcct
ctggttgagcagtacaacagcagaacacagtgttcccacagacggaccctgttggaggtg
gagcagcgattcatccagtcagcagcagcttcctgtcagtctgtagatcaagatgagagt
ctgttttcagcgtacaaagactctctgtgcagcatggtgttttcagctctgtctgaaagt
aattccagtctacagatcacagctgcctctctgctcacctcactggcccaacaaacgggt
ctgctgtcggactctgacatcgatctcgccgtggatcacctgaccagactgctgctgacg
gacgaggacgagtccgtgagcctggctgtggtggagtgtgctggagcgttagcggggcgc
catcctgctgccttcatcgccaaactgatccccacgttaaagaaggagatgtttcctgac
caaagagaggcgtctgagctgcgttcccatgatgccgtgcgtcagcggtgtctgtctgct
ctggctgcggtgtctgtccaggccagcgtcgtccaggagagcgcgcccgtcctcctggac
gtcctcagctcggtgcacgcagatccaagttgtttctccacggatgaggtggtgcacgcc
tgcctgagccttcaaaagatagcggagcgccttcaggatgatgaggagacgagccgatgc
tttcacgacgtggtcatcccgcgccttctgtctctggccctccaagctgcgctgcagagc
gaggggtcctgtggtcggcgcagccccctggtggaggaggcggtcctgtccgccatggtt
ccagttatcagcgccgcctgctcccgccctcagaccatgtttgccgaacagacggcttcc
agagtcgtgtcgctcttcctggacggcgacgtctcatttctacccgacaactccctcccg
tcacaagttccgctgctccagaagaagcagcagcaggaggacgaggattcatggcgtcgg
tcccagctggtgtgtctcctcatggcctgtgtgtgttcgttcccccgcagcgtggaggtt
ccccaggaggagcggctgctgtcggcgctgaaggagctgagctgcagctgcagccatccg
ctctcctacacgtctgccgccaagtgtttcgccgggctcctcaacaagaagcctgaaggg
acggatctggacggctggattcagagaacggtgaagagagtgagcggcgagttggaccgc
acctcctcctcgtgtcgcctgcaggccttcactctgctgatctgggtcgccaaggcgctg
ctgctgcgataccatccgtcgttctcagcgctgaccgacaagctcttctctctgctccac
gacgccgacctcggccccatggccgcagacggcttctcgctgctgatgagcgactcgacg
gacgtcctgaaccgtggttaccacgccgacgtcaggatcatgtaccggcagcgcttcttc
agcgagaattcagccaagctggtgcagggcttcaacgctgcgcctaaagagaagaaaccg
aacttcctgaaagctctgtccaacatcgtcaataagctgccgaagcaggtccaagtctcc
gagctgccggcgctcctgtctctgctgctggaggcgctgacgtgtcccgaccagggcgtc
cagctgtccaccctgtcctgcctggagccggtcctggtgacccccccgcaggtcctgatc
cagcagctggaggcgctggtcagcaggctgctggcgctggtcggcagtccgtccatgaag
atccgcattgcttccatccgatgcgtcctggcgctctcccatctcccctcacatgaggtg
ttgccgttccgagcgcgcgtgctgcgagcgctggctccgcctctggacgacaggaagagg
ctggtgaggagggaggcggtccaggccagaggagagtggttcctgttgggaagcccagga
ggaaggtga
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integrated database retrieval system
