Cyprinodon tularosa (White Sands pupfish): 119773031
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Entry
119773031 CDS
T07496
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119773031 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119773031 (ttc37)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119773031 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_16
TPR_17
TPR_11
TPR_19
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
TPR_7
PknG_TPR
RPN7
TPR_15
Motif
Other DBs
NCBI-GeneID:
119773031
NCBI-ProteinID:
XP_038125751
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSNKEVKAALKSAREAINNKEFKEVLKHCKAVLKLEKNNYNAWVFIGKAASELEQPDQSQ
AAYKKAVELEPEQLLAWQGLANLYENTDQWDFKDELPNVYQKLVELYARTDKNKSYDMIK
KLSDIYLSDREYLKLAKVWLQLVQLKEEDGAEKKELVQLLQTMTQLLSDCVTENEKQDNE
TQQHLITAFEKAMTLTEPMPGEEHRKLSADFIKYLSKLPHEEGKMKEACRSMLSVYPNQS
YPLEVLCSHFLKTSNVDDDAVSCFSRLLELVPNSGLGHLGLGTKALLEGRYKEAVDDLAK
GLKKTSSAGGWYSLAEAQFKIHRYSDSAASSSQGLNVCTSDDKKLRDKLLRLKLEALVRT
EGELAADQALETFSQIPEAVKDPVLLALKGRAHLNKGQLDQTLKLLSELEASNPSLPQGL
TLRGLAHLAEGQLQLAEQSFLQAAKQTPDSGECFFLLGKLYWDMGSETRKDRSKTHTHLL
KAAKLDPHLGCAFRYLGHYYREVANDSARAQGCYRKAFQLNSDDAESGAASVDLSMGQGD
MESALATLESVIEKATPGSAKWAWMRRGLYHLKVGEHQQAISDLQAALRADPEDWVCWEC
LGEAYLNRRSFTAALKSFGKAHQLHPGSIYSVYQAAAIKQTLGKFKEAVDEYLQITTQQD
YVPALKGLGECQLSLAKSLMEDCRDGGAINLIQQAIHNLYRAVQLRPDLSCLWKLLGDAC
TAVRVVSPNRAQVEVPTLLTGFDSSKQDHRLNQTETLKAGERCYAHALKLMPEVASLWYD
LGFNYYHQATISPSDQHQDCPPLNLQKAQQCLKKAIQMDSENHTYWNALGVISMSKGLES
YGLAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELCTHMEGVKGYAYWVCSTLLDKTNRDSELYRYNIVQMNAV
SAAHVALCKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYRRAVELLKSTSSSDLLVFS
LGGYARALCNSGQWEEAVQVFNSTPLQDLTELVGLALAYCRAGLFAESISAYERALAVTS
NEKEKAYILTALALLQHRMGNLDSAKTLLFKCSVLKEPISESLLCLCALGLVHSDATLAA
AALTELLKQGSASGGVVEQRCLLTCSLLALQGNYSAVQREASRAVHSNPGNASLWALLSR
VIPQYYPRKARGGAVAGHIACLFSMTQGKRALLYSGVNQVAYGKHTGEDPHRNAFKTLQK
AVVLCPDDPATWAGLMAACHTENTACYLSGSPPHRQSLEHTLMSVVSEKVRNVEEMERPL
PQALEGWVLQQAVLGLRQQGQLEQAEALCMQVLSVSPEHPAVLLSLTQVQCQRLLLTEGG
TVLPEQVLEKLNKAVLMNPTNLGAWHWLAEVYRNQGLLVQAVMAYRQSLQLALQLGAHSF
QVASLLRLALLALGPCMAGVPGNDWKDLVMEATTEVLKLGSSPMALLFQALLQYVNKMTA
RETRRLLERLVYVSSDDTPVTVVQVASWYLLRLLHAKNDQELINVLLQHAKTTGNQRLLE
LHSQLTSSSS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaaagaagtgaaagccgcactgaaaagtgccagagaagccattaacaataaa
gagttcaaagaggtcttaaagcactgcaaggctgttctgaaacttgaaaagaataattac
aatgcctgggtgttcatcggcaaggcagccagcgagctggaacaacccgatcagtcccaa
gcagcttataaaaaggcagtggagctggagcctgagcagctgctggcctggcagggattg
gcaaatctttatgaaaacactgatcagtgggatttcaaagatgaactgcctaatgtctac
cagaagcttgtggagctttatgcaaggacggataagaataaaagctatgacatgatcaaa
aagctgtcagatatttatctgtccgacagggagtatttgaagctggctaaggtttggctc
cagctcgtccaactgaaggaggaagacggcgcggaaaagaaggagttagttcagttattg
caaacaatgacccagctcctgtctgactgcgtcactgagaatgagaagcaggataacgag
actcagcaacacttgataacggcgtttgagaaagccatgactctcactgaaccgatgcct
ggagaggagcacaggaagctctcggctgattttattaaatatctctccaaactaccacat
gaggaaggcaaaatgaaagaggcgtgtcgctccatgttgtctgtgtatccgaaccaaagc
tatcctctcgaggtcctttgcagtcattttctcaaaacaagtaacgtggatgatgatgca
gtcagctgtttctccagactcctggaactggtacctaacagtggattgggtcacttgggt
ctgggtaccaaggctctgctggaggggaggtataaagaagctgtagatgacctggcaaag
ggattaaagaaaacaagctctgcaggtggatggtacagtctggctgaggctcagtttaaa
atacatagatactccgacagcgctgcatcaagctcacaaggcttaaatgtttgtacttct
gatgacaagaagctaagagacaaactccttcgactgaagctggaggctttagtgagaact
gaaggagagctggctgccgatcaggctctggaaacattttcccagattccagaggctgta
aaggatccggttctgttagccctgaaaggacgagcgcacctgaacaaaggacagcttgat
caaacactcaagctgttgtcggagctggaagcgtccaaccccagcctgccccagggactg
actctgagaggactggcacatttggctgagggtcagctccagttggcagagcagagcttc
ttacaggcagcaaagcagaccccagacagcggggaatgttttttcctccttggaaaactt
tactgggatatgggctcagaaactcgtaaagaccgcagcaaaacacacacacacctgtta
aaggcagcaaagttagatccacatcttggctgtgcgtttcgctacctgggtcattattac
cgagaggtggcaaatgatagtgctcgtgcacaagggtgctacaggaaggcattccagtta
aacagtgatgatgctgagtctggagctgcttcagtggatcttagtatgggacagggagat
atggagagtgcattggcgacgcttgagtctgtgatagagaaagcaactccaggctcagct
aagtgggcctggatgagacgaggtctgtaccacctgaaggttggagaacaccaacaggcc
atatctgatctgcaggctgctttgagggcagatcctgaggactgggtttgctgggaatgt
ttgggcgaggcctacctgaacaggcggagcttcacagcagctctgaagtccttcggcaaa
gcacatcagcttcaccccggctccatctacagcgtttaccaggcagctgccatcaaacag
actctggggaagttcaaagaggcggtggatgagtatttgcaaatcacaacgcagcaggac
tacgtccctgctcttaaaggtcttggggagtgccagttgtctttggcaaagagtttaatg
gaagactgcagagacggaggagcgatcaacctcattcaacaagccatacacaacctctac
agagcggttcagctgcggccagacctgtcttgtttgtggaagctgctcggtgacgcctgc
accgcagttagagttgtttcgcccaacagggctcaggttgaggtgccaaccttactgact
ggatttgactccagcaaacaggatcacaggctgaaccaaactgagacactcaaagctgga
gaaaggtgttacgctcatgctttgaagttgatgcctgaggtcgccagcctttggtatgac
ttagggttcaactattaccaccaggccactatctccccttcagatcaacaccaagactgc
ccccctttgaacctgcagaaggcccagcagtgcttgaaaaaagctatccaaatggacagt
gagaaccatacctactggaatgccttgggagtgatttccatgagcaaaggtctggagagc
tacggtttggcacaacattgcttcattaagtccatccaagttgagccaaataatgttgtc
gcgtggacgaacctcggtacgttgtatttaaaaaaggacaatatagagcttgcacatgaa
gccttcaaaatcgcccagtctttggagccactgtatgtcaactgctggattggacaggcg
ctgatcgcagagcgcgtgggaagctacgacaccatggatcttttcaggcacaccactgaa
ctctgcacacacatggaaggagtcaaaggttatgcctactgggtttgttccacccttttg
gataagactaacagagacagtgagctgtaccgctacaacatcgtccaaatgaatgccgtc
tctgctgctcatgtcgcgctctgcaagtacacagaaagaatccagtctgatccagatgct
tttattatgctgggttaccttaatgaacacctccagctgaagaggcaggccttacaggct
taccggagagctgttgaactgcttaagtccacatcctcttcagatctgttggtcttttca
ctcggcggatacgcccgtgctttatgcaattcaggccaatgggaggaagcagtgcaggtt
tttaattccactccacttcaggatctaactgagctggtagggcttgctctggcctactgc
agggcgggactcttcgcagagagcattagcgcatatgagcgtgccttagctgtgacgtcc
aatgagaaggagaaggcttatattttgactgctctggctttgctgcagcaccgaatgggc
aacctggactctgccaaaactctgctttttaaatgttccgtcttaaaggagcccatctca
gagtctctgctttgtttatgtgctctgggattggtccacagtgatgctacactagccgct
gccgccctgactgagctgctgaagcaaggttcagcatcagggggggttgtagagcagcgg
tgtctgctgacctgctccttgctggcccttcagggaaactacagcgcagtgcaaagagag
gcctccagagctgtgcacagtaatcctgggaatgcatccctgtgggctcttttgtccaga
gtaataccgcaatactaccctagaaaggcccgggggggtgcagtggcaggtcacattgcc
tgcctctttagtatgactcaaggaaagagggcactgttgtacagtggagtaaaccaagtg
gcttatgggaaacatactggagaggatcctcacagaaatgcatttaagactctgcagaaa
gctgttgtgctctgtcctgatgatccagcaacatgggcgggattaatggcagcctgtcac
actgaaaacaccgcctgttatctttctggctctcctcctcacagacagtcactggaacac
actttaatgtctgtggtctctgagaaagtgcgtaacgtagaggagatggagcgccctttg
cctcaggctctggaaggctgggtgctacagcaggctgtgttaggtctaaggcaacaaggg
cagctggagcaggctgaggctctctgtatgcaggtcctcagtgtgtcaccagagcaccca
gcggtgctgctgtcactgacacaggttcagtgtcagcgcctcctcctgaccgaaggcggt
actgttcttccagaacaggtcctggaaaagctaaacaaagcagttctgatgaaccctaca
aaccttggagcgtggcattggctggctgaggtgtatcgtaaccagggtctgctagtccag
gccgtcatggcatatagacagagtctgcagcttgccctgcagctgggggcacatagcttc
caggtggctagtctgctccgactggctctgttagcccttggaccgtgcatggctggagtc
cctggaaatgactggaaggatcttgtgatggaagccactacagaggttctgaagctgggc
tcttctcccatggccctcctcttccaggctttgctccaatatgtgaacaagatgactgca
agagaaacaaggcgtttgctggagagactcgtctatgtttcctctgatgacaccccagtg
acagtggtgcaggttgccagttggtaccttctcagactcttgcatgccaaaaatgaccag
gaactcatcaatgttcttttgcagcatgctaaaacgactggtaatcaaagactgctggag
cttcactcacagctgacgtcgtcctcatcctga
DBGET
integrated database retrieval system
