KEGG   Cyprinodon tularosa (White Sands pupfish): 119773157
Entry
119773157         CDS       T07496                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04510  Focal adhesion
ctul04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119773157 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119773157 (lamc1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B Death Alanine_zipper Laminin_I
Other DBs
NCBI-GeneID: 119773157
NCBI-ProteinID: XP_038125931
LinkDB
Position
Unknown
AA seq 1610 aa
MGVLGATGRTERSGRMQNLVLVLVAWSWVAAVCVRGAMDECADDQGRAQRCMPEFVNAAF
NVTVEATNTCGSPPEEYCVQTGATGVTKSCHICDARDPRNHHNAVYLTDYNNQQDATWWQ
SQTMLAGIQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFVIYKRTREDGPWVPYQYYS
GSCEKTYRKPSRGFIRTGGDEQEALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPV
LQDWVTATDIKVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVRRS
GGRLVCDCKHNTEGVDCDVCKPFYNDRPWRRATADNPNECQPCNCNGKSSECYFDAELYR
ATGHGGHCRNCADNTDGPNCERCLDNYYREQSNGRCQPCYCNSIGSESLQCNNRGVCACK
PGVTGEKCDRCQPGFHSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKP
GYFNLDPNNLQGCTACFCFQHSSVCDSASDYSVHTISSTFQRGDEEWSGQQRDGSTISVQ
WSASGQEVSLMAEDYQPLYFVAPEKFLGNQMLSYGQNLSMNFRVERRDARLSAEDLILEG
ADMRVAVPLITQGNAYPNENMQNYVFRLHMQPGQPWRPVVSDSDFQKLLHNLTAIKIRGT
YSERSAGYLDNVSLVTARRGPGTPARWVEECRCPPGYQGQHCEQCTVGYRRSQPELGPFS
SCEICNCHGHSDSCHPETGACDCQDNTAGLSCERCKDGFYGNATRGTSGDCQPCPCPAGA
TCAVVIKTNEVVCTNCPSGTTGKRCELCDDGFFGDPLGQNGPVRACRACQCNGNTDPNAV
GNCNRENGECLKCIYNTDGFFCDRCKDGYYGNALAPSPADKCKPCSCSPLGTVDQQTSCL
QVTGQCPCLPNVAQRDCSACLPGFFNLQSGSGCERCNCNPIGSSSGECDIITGQCECQPG
ITGMHCDRCEVNFFGFSSSGCKPCDCDLEGSLSGQCKEDGRCECRPGFVGARCNMCEENY
FYNRSVPGCQQCPSCYSLVRDKVNQQRQKLQELQNLIDNLGSGQDTVSDKAFEDRLKEAE
KTIMELLEEAQSSKDADQGLLDRLNALNNTLTTQLNRLLNIRNTVDNTSTQADRARDRVR
DAESLINRARQELAKAKDAVSKVDIKPTGETGEPNNMTLLAEEARRLAEKHKMDADQIEK
IAKDANDTSTKAYNLLLKSIDGESKMGEEIDKLNKMYNDAKNQAKDLEKQAKKVQDEAEE
AGNKALKLFGNLTSLPPFDTKTLEDDAKKIKKEASDLDTLIDKTEREYNELRDDLKPKEL
EVRKLLDKGKSEQQTADQLLARADAAKALAEEAAKRGQATFKEAENILEDLRDFDRRVND
NKTAAEEAMKKIPFINATIIAANEKTRQAQEALGNAAADARDAKKKAEDAEKIAGNVQKG
SAKTKEEAEKALQDTEKLDKDVNDMMDQLSAAEEELKKKKAEADNDMMMASMASDNAKEA
EDNARKAKSTVKTVLKIITDLMDQLGNIDKVDLSKLNQINESLNRAKEKMAGSELDNKLK
ELNDVARTQKEMIDDYDRQILEIRSDIDNLNDIKNTLPTGCFNGQPLEQA
NT seq 4833 nt   +upstreamnt  +downstreamnt
atgggagttctgggagcgacggggaggacggagcggagcggcaggatgcagaacctggtc
ctggttctggtggcttggagctgggtggccgcggtgtgcgtccgcggcgccatggatgag
tgcgcggatgatcagggccgagcgcagcgctgcatgccggagttcgtgaacgcggccttc
aacgtgacggtggaggcaaccaacacctgcggctccccgccggaggagtactgcgtccag
accggggccaccggggtcaccaagtcctgccacatctgcgacgcgcgggacccccggaac
caccacaacgcggtgtacctgaccgactacaacaaccagcaggacgccacctggtggcag
agccagaccatgctggcggggatccagtaccccaactccatcaacctcaccctgcacctc
ggtaaggcctttgacatcacctatgtccgcctcaagttccacaccagccgtccagagagc
ttcgtcatttacaaacgcacccgggaggacggcccctgggtgccctaccagtactacagc
ggctcctgcgagaagacctacaggaagccgagccgcggcttcatccgcaccggcggtgac
gagcaggaggcactctgcaccgatgacttcagtgacatatcgccgctcacaggaggaaac
gtggctttctctacgctggagggacgaccgagtgcctacaactttgacaacagccccgtc
ctccaggactgggtgacggccacagacatcaaagtgaccctgaacagactcaacacgttc
ggagacgaggttttcaatgatcccaaggtcctgaagtcctactactacgccatctctgac
ttcgctgtgggaggaaggtgtaagtgtaacggccacgccagcgagtgtgtgaggcgcagc
ggcgggcggctggtctgcgactgcaaacacaacaccgaaggcgtggactgcgacgtctgc
aaaccgttctacaacgaccggccgtggaggagggcgaccgccgacaaccccaacgagtgt
caaccctgtaattgtaacgggaagagctcagagtgttacttcgacgcagagctgtaccgg
gccacgggtcacggaggtcactgcaggaactgtgccgacaacacggacgggcccaactgt
gagcgctgcctggacaactactacagagagcagagcaacggccgctgtcagccctgctac
tgcaactccatcggttctgaatctcttcagtgcaacaacagaggggtgtgcgcctgtaaa
cctggagtgacgggagagaagtgtgaccgctgccagccggggttccacagcctgaccgag
gcaggctgcaggccttgttcctgctctccgtccggcagcactcaggagtgcgatgtcaac
acgggtcagtgccgctgtaaggacaatgtggagggcttcagctgcgacagatgtaaacca
ggttacttcaacctggaccccaacaaccttcagggctgcacggcctgtttctgcttccag
cactcctcagtttgtgacagcgcctcagactatagcgttcataccatcagttcgaccttc
caaagaggtgatgaggaatggagcggtcagcagcgggatgggtctaccatctctgtccag
tggtctgccagtgggcaggaagtgtccctgatggctgaggactatcagccgctgtacttc
gtggccccagagaagttcttggggaatcagatgttgagttatgggcaaaaccttagtatg
aatttccgagtggagcggcgggatgctcgcctgtctgctgaggacctgatcctggaaggg
gccgacatgagggttgccgtccccctcatcacccagggcaacgcctacccaaacgagaac
atgcagaactatgtgttcaggcttcatatgcaacccggtcaaccctggagacctgtggtc
agtgactcggatttccagaagcttctccacaacctgacggccatcaagatccggggcact
tacagcgagaggagtgctggttacctggacaacgtctccctggtgacagcaaggaggggc
ccgggaacgccggctcgctgggtggaggagtgcagatgtcctccaggttaccagggacag
cactgtgagcagtgcaccgtgggataccgccgttcccagccagagcttggacccttcagc
tcctgtgagatctgcaactgccacggacacagcgacagctgccaccctgaaactggtgcg
tgtgactgtcaggacaacaccgctggactgagctgtgagcgctgtaaggacggcttttat
ggcaacgccactcggggcacatcgggtgattgtcagccatgtccctgccctgccggagcc
acctgcgctgttgtaattaaaaccaatgaggtggtttgcaccaactgtccttcaggaacc
acagggaagcgctgtgagctctgcgatgatgggttcttcggggaccccctgggtcagaac
gggccggtccgagcctgccgggcctgccagtgcaatggtaacactgaccccaacgctgtt
ggcaactgcaaccgtgagaacggagaatgtctgaagtgcatctacaacacggacggcttc
ttctgtgaccgctgcaaagatggttactatggcaacgccctggcccccagccctgctgat
aagtgcaaaccctgctcctgctcccccctggggacggtggaccagcagaccagctgtttg
caggtcaccggtcagtgtccgtgtctgccaaacgtggctcagcgggactgcagcgcctgc
ctcccaggcttcttcaaccttcaaagcggcagtggctgtgagcggtgtaactgtaacccc
attggctcctctagtggtgaatgtgacatcattacaggacagtgtgagtgccaacccggc
atcaccggcatgcactgcgatcgatgtgaggtcaacttttttggcttcagctcttcagga
tgcaaaccttgtgactgtgaccttgaagggtctctgtccggtcagtgtaaggaggacggg
cggtgcgagtgtcggcccggctttgttggagctcgatgcaacatgtgtgaggagaattat
ttctacaaccgatcagtgcctggctgccagcagtgtccgtcttgctacagtttggtcaga
gacaaggtgaaccagcagaggcagaagctccaagagctccagaatctgatagacaatctt
ggctccggccaggataccgtcagcgataaggcctttgaggatcgactaaaagaggcagaa
aagaccattatggagctactggaggaggctcagagcagcaaagatgcagaccaaggtctg
ctagatcgtctgaacgccctgaacaacaccctaaccacccagttgaaccgtctgctgaac
atccgtaacacggtggacaataccagcactcaggcagaccgcgctcgggacagggtcaga
gatgccgagagtctgattaaccgagctcggcaggaattggccaaggccaaggatgccgtc
agtaaagtggacatcaaacctaccggtgagaccggagaacctaacaacatgacgctgctg
gctgaggaggctcgacgccttgccgaaaagcacaagatggacgctgatcagattgagaag
attgccaaagatgccaatgacacgtcgaccaaagcatataacctgctgcttaagagtata
gatggagagagcaagatgggtgaagaaatcgacaagctcaacaagatgtacaatgacgca
aagaatcaggccaaggatctggagaagcaggccaaaaaggtgcaggatgaggcagaggag
gcagggaacaaagctctgaagctgtttggcaacctgaccagccttccaccatttgacacc
aagaccttggaggatgatgccaaaaagattaagaaggaggcgtctgatcttgacactctg
atcgacaagacagaacgggagtacaatgaattgcgagacgaccttaagcccaaagagctg
gaggtccgaaagctactggataaaggaaagagcgagcagcagaccgcagatcagctattg
gcccgagccgatgcagccaaagctttagctgaggaggcagcaaagaggggccaggcaact
ttcaaagaagcagagaacatcctagaggacctccgagactttgacagaagggtcaatgac
aacaagacggctgcagaagaagccatgaaaaagatcccctttatcaatgccaccatcatc
gctgccaatgagaagacccggcaggcccaggaggcgcttgggaatgcggctgctgacgcc
cgggatgcaaagaagaaggctgaagacgctgagaagattgcaggcaacgtacagaagggc
tcagctaagaccaaagaggaagcagagaaggcactccaggacactgaaaagctggacaaa
gacgtgaatgacatgatggatcagctgagtgctgcagaggaggagctgaagaagaagaag
gctgaagctgacaatgacatgatgatggcgtccatggcgtcggataacgccaaggaggct
gaggacaacgcccgtaaggccaagagtactgtgaagacagtcctgaagatcatcacagat
ctgatggaccagcttggaaacattgataaagtagaccttagcaaactgaaccagattaat
gagtctctgaaccgggccaaggaaaaaatggccggcagcgagctggacaacaaactgaag
gagctgaatgacgtggcgaggacacagaaggagatgatcgacgactacgaccggcagatc
ctggagattcgcagtgacatcgacaacctaaatgacatcaaaaacacgttacccacaggc
tgcttcaacgggcagccactggagcaagcttag

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