Cyprinodon tularosa (White Sands pupfish): 119773421
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Entry
119773421 CDS
T07496
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
ctul03015
mRNA surveillance pathway
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119773421 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
119773421 (acin1b)
03015 mRNA surveillance pathway
119773421 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119773421 (acin1b)
03041 Spliceosome [BR:
ctul03041
]
119773421 (acin1b)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119773421 (acin1b)
Spliceosome [BR:
ctul03041
]
Complex C
Other components
EJC/TREX
119773421 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
119773421
NCBI-ProteinID:
XP_038126353
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQRSSSSHS
GLQPNSQIGEEMCQNSFIKQYLAQQQELLRQRLAREAQREEEADESPAGAEEDEDQSEEN
DSPPFTSKHQGTLEQPSGPDVGGDNSVSGRGSAPASHRRESTEAPRARLQRGPQGPKEPS
ATSPPRAVASFSVRVLGQPDMQGYAAALPPGQEKEAATPKKAQPALNLSRSARSSAENHV
KDDSDEEEEDDDDSDEDEDWGPGPGGARRRKATVPSKQPVAPSASSATARSKRKLQPPQH
IPPPQVHDTPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDDQERGAPDGMDSFPPPPMQRQ
DSGSSSGSSSPEPPVKRRSGPLSLLMDRMESEEGTSSPGFSGETAHSTATCSSESPLPSS
ETKTQQEGERQRKEEREGERLKRQEQEMEKKRLEEEKEKERERLQEERKQRQKEEEEKRH
QELEKEKKHKEEEKRREEQRLKEEEEKKQEEERIDQKAAAAEKDSDSSSDSDSKSESSSR
SSSSSSSSSSSRDKVQPASQLKKADEGQRAEVNEKTKLNKDSEKPNLSKREVSEPSTAAV
TEVEPDSESSMAQQPASGAEPESSESRTEESTTPKAFAARKISLSSSKASPASTDGGAGE
SETGNAAGRKRRWGSSTAVTVKKPSISITTDSLKSLIPDIKVNQDAVVDLHPEELQTSGD
EENSDAGRSDPDKGLKIRRTVTQVVPSESQENGQTNVEEEMEKTEDEKQPKTPREKKSSV
SEETSETQITVSLDGEAKKVPSGEESKSVVTMEVDKKLPVTPSDSLVRRSISQQKSGVSV
TIDDPVRTSRQPSPPRGKISNIIHVINLVRPFTLLQLKELLNRTGTVVEEGFWIDKIKSH
CYVTYTTTEEAVATRTALHGVKWPASNPKVLSVDFCEQDELDYHKGIRKPEKEQEQVIPA
PVAAPPQPRLPPLMPVRDRDKEQDRERERDRERDRGVRDLWAERQREMERRERARGEREW
DRDKVREFARPGEEGRRSRSRERERRRRERAKSKEKKTDKKEKDEPPAKLLDDLFLKTKA
APCIYWLPLTEEQANQRILDRVERQKERERRRKELDEENSKKRDEEKKERLKGREKEVGA
VAASGGPSGRGADAERSRDREGDKRRDSSHRSRRASPVSGSGRRSRSRSNPRDRRR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacagtcgctccgagttgcggat
ttgaaagctgctttggagcaaaggaacctaccaaaaagcgggcagaaaaacactctaata
aagcgacttaaaggggctctgatgctggaaaacctacagaggtcatcatcttctcatagt
gggctgcagcctaattcacagataggagaagagatgtgtcagaacagtttcattaaacag
tacctggcccagcagcaagagctcctacgacagagacttgcgagagaggcccagcgggag
gaggaggccgatgaaagcccagctggagcagaggaagatgaagaccagtctgaagaaaat
gacagccctcccttcaccagcaagcatcaaggcaccctggagcagccctctggtcctgat
gttggaggggataactctgtgagtggtcgtggatctgctcccgcttcccaccgccgagag
tctactgaagccccaagagcgcgtttgcagcgcggcccccaaggacccaaggagccatca
gccacctcccctccacgagctgtcgcctccttctcagtccgtgtcctgggacagcctgac
atgcaaggatacgcagccgctttgcccccaggccaggagaaggaagcagccactccaaaa
aaagctcagcctgcgctcaatctcagccgctccgcccggagttccgctgaaaaccacgtt
aaagacgacagcgatgaggaggaggaggacgatgatgacagcgatgaagacgaggattgg
ggaccaggtcctggaggggcaagaaggagaaaggcaacggttccctcaaagcagccggtg
gctcccagtgcgtcatcagctactgcaagatccaaacgcaagcttcagcctcctcagcac
atccctcctccgcaggtacacgacactcccatgcagctgcgtcacccaacacctcccccc
tctccaccccctaacctcttccccctacctgacactccaaagcaaagccccccagatgat
caagaaagaggagctccagatgggatggactctttcccgcctccccccatgcagaggcaa
gactccggctccagctccggctccagcagccccgagcctcctgtgaagcgccgctccggc
cccctctcactgctcatggacaggatggagtcggaggaagggacctcatctcctgggttc
tccggagaaacggcacattcaaccgctacgtgttccagtgaatcccctcttccgtcatcg
gaaacaaaaacgcaacaggaaggagagagacagcggaaggaggagagggagggagagcgt
ctgaaaaggcaggagcaagaaatggagaagaaacgcctggaggaagagaaggaaaaggaa
agagaacggctgcaagaggagaggaagcagcgacagaaagaggaagaggaaaaaagacac
caggagttggaaaaagaaaagaaacacaaagaggaggagaagagaagagaggagcagcgg
ttaaaggaggaggaagaaaagaaacaagaggaggagaggattgaccagaaagcagcagct
gcagaaaaagattcagactcctcctcagattcagactccaaatcagagtcttcctcacgc
tcatcatcatcatcatcctcttcttcctcctccagggataaagttcagcctgccagtcag
ctgaagaaggcagacgaaggacaaagggcagaggttaatgaaaagactaagttgaataaa
gactctgagaaacctaacctttcaaaaagggaggtgtccgagcccagcacagctgccgtt
accgaggtggaaccggactctgagagctccatggcccagcagccagcatctggggctgag
cctgagagcagcgagagccgcacggaggagagcaccactcctaaggcttttgctgctcgc
aagatatccctgtccagcagcaaggcatctccagccagcacagatggaggagcaggagag
tctgaaacggggaacgctgcagggaggaagaggcgatggggctccagcacagcagtcact
gttaagaagccatcgatcagcatcactacagactccctaaagtctctgattccagacatc
aaggtgaaccaggacgcagtggtggaccttcaccccgaggagctgcagacgtccggagac
gaggagaactctgacgccggtcggagcgaccctgataaaggcctcaagatccgacgcacc
gttacccaggttgttcccagtgaaagccaggaaaacggacaaactaatgtagaagaagaa
atggagaaaacggaggatgaaaagcagccaaagactccacgggaaaagaagagcagtgtg
tctgaggaaacgtctgagacgcagatcactgtcagcctagatggagaggcaaagaaagtt
ccttccggtgaagaatcgaagtctgtcgttaccatggaagtggataaaaaactaccagtg
actcccagcgacagtctggtgcggcgctccatcagtcagcagaagtctggcgtttccgtc
acaatcgacgaccctgttcgcacatccaggcagccctcaccgcctcgaggaaaaatctcc
aacatcatccatgtgataaacctggtccgacctttcactctgctccaactcaaagagctg
ctgaaccgaacggggactgtggtggaggagggtttctggatcgacaagatcaagtctcac
tgctacgtcacatacacaacaacagaggaggcggttgccaccaggacggctcttcatgga
gtcaaatggcctgctagtaaccctaaggtgctcagtgtggacttctgtgagcaagatgag
ctggactatcataaaggcatccggaagccagagaaagaacaggagcaggtcatccctgct
cctgttgctgctcctcctcagccccggctgccccctctgatgcccgtacgggacagggac
aaggagcaggacagagagcgggagcgtgatcgggaacgggacagaggagtccgggatctg
tgggcagagcgacagagggagatggagcggcgagaacgggctcgaggggagcgagagtgg
gaccgggacaaggtccgggaatttgccagacccggagaggaggggcggcgatctcggtcc
agagagagggagaggaggaggagggagagagcaaagagtaaggagaagaagactgataag
aaggagaaagatgaacctcctgctaaactactagacgacctgttcctgaagaccaaagca
gctccctgtatatactggctccccctcaccgaggagcaggcgaaccagaggattctagat
cgcgtggaacggcagaaggagcgcgaacgaaggcgcaaggagctagacgaggagaacagc
aagaagcgtgacgaggagaagaaagagaggctcaaggggagggagaaggaggtcggcgcc
gtggcagcaagcggtggaccttccgggagaggagccgacgccgagcgcagccgagacaga
gaaggggacaagaggagagacagcagccaccgatccagacgagcctcgccggtgtcaggc
agcggacggcgctcccgtagtcgcagcaacccccgggacaggcgccgctga
DBGET
integrated database retrieval system
