Cyprinodon tularosa (White Sands pupfish): 119773572
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Entry
119773572 CDS
T07496
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5 isoform X1
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119773572 (trpm5)
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119773572 (trpm5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
Motif
Other DBs
NCBI-GeneID:
119773572
NCBI-ProteinID:
XP_038126505
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Position
Unknown
AA seq
1229 aa
AA seq
DB search
MPEKQDTPLRPLEPQTRCLRCGETLEWSEEHSVLLGCSCCSAVDEAIENVARGLANKMKE
KTHWAAGRVGDIDFIGSTKTKGKFVRVCSNTDPVLIYKMLTEEWGLSPPHLVVALVGGDE
LAQMKPWLRDTLRKGLVKAAQSTGAWILTNGLRFGITKHLGQAVRDHSLASTSSKVRVVA
IGIAPWNMIHNREALLTAKVDEPAVYRPQDLPHGSVYSLDSNHSHFVLVEEDPNRPGATS
EMRVKLLKHISLQRTGYGGAGSFEIPVLCLLVHGEPRILKRMYKGIGNFTPWLILAGSGG
VADILVTLMNRGCWDTDSVHELLLDTFPNAHHSTDISNWVKLIQKILDHGHLLTVHDPEQ
ESSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSDIFNGDVEWKACDLE
EVMMDALINDKPDFVRLFVDNGVNLGEFLTYGRLQELYWSVSEKSLLHNLLLKKYEEKQL
LLGAARTPGPPGHHPSEQGKPRFTLFEVAKVLKDFLHDSCKGFYQKMPAEKPPKGRLFHS
QKNLPEFEERCEHPWRDLFLWAVLQNRQQMANYFWAMGPEAVAAALAGCKILKEMARLES
EAESARSMKEAKYEQFALDVFGECYSNSEDRAYALLVRRTHCWSKSTVLNLATEADAKSF
FAHDGVQALLTKLWWGAMTTDTAISKLVVSFFIPPLIWTNLIKFSEEELDNRDGKKEFVE
LDSLDTEKALLLTDDDPLDSSPGGQTSQSCATVWWRFLLRRWRRFWSAPVTVFLGNVIMY
FAFLCLFTYVLLLDFRPPPPFGPGVPEILLYFWVFTLVLEEIRQSFFTDEEMSILKKFKL
YVEDNWNKCDMVAILLFVVGVSCRMSNGTYEAGRTVMAIDFMVFTLRLIHIFAINKQLGP
KIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDPRIDWVFRRALYRPYLHIFGQI
PLEEIDAARFPDINCTDKPEEIIQGLLPPCPNLYANWLVILLLVIFLLVTNVLLLNLLIA
MFSYTFQVVQGNTDIFWKFQRYNLIVEYYSRPALAPPFIIISHISQLFLCMVKRPESKQE
HLERELPAGLDQRLITWETVQKENYLAKVERQHWESSEERLKSTSSKVQNLLKIVGRFKD
QEKRLVSVESQVRYCAEVLSWMAECFTKSTLKCEKDAPKAPTSLTGTKADSTAETSQIHQ
EQEARQKEEESKPGHPGYGANKKFPYIDE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaagcaagacacacctctgaggccactggagccacaaacacgatgccttcgg
tgtggggaaaccctggagtggtcagaagaacacagtgtcctccttggctgctcgtgttgt
tctgcagtggatgaggctattgagaatgtagccagaggcctagccaacaaaatgaaggag
aaaactcactgggcagctggaagagtgggtgacattgactttattggatctacaaagact
aaaggaaagtttgtgagggtttgcagcaacacagacccagttttgatttacaagatgctg
acggaggagtggggactctctcctccacacttggtagtggcattggtgggaggagatgag
ctcgctcagatgaagccctggctcagggacactcttagaaaaggacttgtgaaagcggca
cagagcacaggggcatggattttaactaacggtctgcgctttgggataaccaagcatttg
ggtcaggcagtgagagatcactccttggccagcacctcctctaaagttcgtgtagtggcc
attggtatcgcaccctggaacatgatccacaaccgagaagctctccttactgccaaggtg
gatgagcctgcagtatacagaccacaggatttgccccatggctcagtgtattccttggac
agtaaccattctcattttgtgcttgtggaagaggatcccaacagaccaggagccacgagt
gaaatgagagtaaagctgctcaaacacatctcccttcagcggaccggttatggaggagca
ggaagttttgagatccctgttctgtgtctcctggtccacggggagcccaggatcctaaag
aggatgtataaaggcattggaaatttcacaccctggctgattctggcaggctctggaggc
gtggctgacatcctagtcacgctgatgaacagaggctgctgggacacagacagcgttcat
gagctgctgttggacacctttcctaatgcccaccacagcacggacatcagtaactgggtc
aagctgatccaaaagatactcgatcatgggcaccttctgactgtccatgacccagaacag
gaaagctccgagctggatacagtcattctgaaagctcttgtcaaggcctgtaagagtcaa
agtcaagaagctcaagactttctggatgagctgaagctggctgtggcctggaacagagtg
gacattgccaagagtgacatttttaacggagatgtggaatggaaggcttgcgaccttgag
gaggtgatgatggatgccctcattaatgacaaaccagactttgttcgcctctttgtggac
aacggggtgaacctgggggagtttcttacctatgggcgcctacaggagctttactggtct
gtgtcggaaaaaagcctcctccacaacctgcttctgaaaaagtatgaagagaagcagctc
ttgcttggggcagcaaggacacctggtccaccaggacaccatccctctgagcaaggaaaa
ccacgcttcaccctttttgaagtagccaaagtcctgaaggacttcctgcatgactcttgc
aaaggcttttaccaaaagatgcctgctgagaaaccaccaaagggccgattgttccacagc
cagaagaacctgcctgagttcgaggagcgctgtgaacatccttggcgagatcttttcctc
tgggctgtccttcagaaccgacagcagatggctaactacttttgggccatgggccccgag
gcggtagcagcagctctggcaggatgtaagattctgaaagagatggcacgcctggaatct
gaggctgagtctgcacgcagcatgaaggaggccaaatacgagcagtttgcccttgatgtc
tttggagagtgttattccaacagtgaagacagggcttatgctttgttggtgagaagaaca
cactgctggagtaaatccacggttctcaacttagcaaccgaggctgatgccaaatccttc
tttgcccacgatggagttcaggctctcctcacaaagctttggtggggcgccatgacaaca
gacactgccatctctaaacttgtggtctctttcttcattccaccccttatctggaccaac
ctcatcaagtttagtgaggaggaactggataatcgggacggtaagaaggagtttgtggag
ctggacagccttgacacagaaaaggctttactgctaacagacgatgatcctttggattct
tctccaggaggtcagacatctcagagctgtgccactgtttggtggcgcttcctgctccga
cgctggcgtcgcttctggagtgctcctgtcacagtgttccttggcaacgtcatcatgtac
ttcgcctttctctgcctcttcacttatgtgcttcttctagacttccgcccaccgccacct
tttggtcccggagttccagagatactgctttacttttgggtgttcaccttggtgctagaa
gaaatccgacagagcttcttcactgacgaagagatgagcatcctaaagaaatttaagctg
tatgtcgaggacaactggaacaagtgtgacatggtggccattttactctttgttgttggg
gtttcctgcagaatgtccaatggcacctatgaagcggggcggacggttatggccatagat
ttcatggttttcactttacgcctcatccacatctttgctataaacaagcaacttggcccc
aagatcatcattgtggaaagaatgatgaaggatgttttcttcttcctcttttttctgagt
gtgtggctaattgcttatggcgtagctacacaggctcttctccaccccaatgacccaaga
attgactgggtgtttcgtagagctttataccgcccttacctgcacatatttggacaaatc
cccctggaggaaatagatgctgctcggttcccggatattaactgcaccgataaaccagaa
gagattatccagggtctgctaccgccatgccccaatctgtacgccaactggctggtcatt
ctactgctagttatcttccttcttgtcaccaatgtgcttctgcttaacctcctcattgcc
atgttcagctacaccttccaagtggtgcagggtaacacggacatcttctggaagttccag
agatataacctgattgtggaatactacagccgtcctgcgctggccccacccttcatcatc
atcagccacatctctcagctcttcctctgcatggtcaaacggcccgagtctaaacaggaa
caccttgagagggagctgccagcaggactagaccagaggctcataacatgggagacggtg
cagaaagagaattacctggcaaaagtggagcgccagcactgggagagcagtgaggagaga
ctcaagagcacctcctcaaaggttcagaacctgcttaaaattgttggcaggtttaaggac
caagagaagcgactagtatcagtggaatctcaggttagatattgtgcagaggtgctgtcc
tggatggcagagtgctttacgaaaagcacactcaaatgtgaaaaggatgctccaaaagct
ccaacatctctaacaggcaccaaagcagacagcactgcagaaacgtctcaaattcatcag
gagcaagaagccagacaaaaggaggaagaatctaaacctggtcacccaggatatggagcc
aacaagaaatttccttacatcgatgaataa
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integrated database retrieval system
