Cyprinodon tularosa (White Sands pupfish): 119773599
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Entry
119773599 CDS
T07496
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119773599 (lingo1b)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119773599 (lingo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
Ig_C17orf99
LRR_R13L1-DRL21
LRR_LRWD1
LRRNT
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
119773599
NCBI-ProteinID:
XP_038126580
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTVLVNSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSKCDCNGQERSVVCHR
RRLAALPEGIPTETKLLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRSNELKLIQLGVFTGMVNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLTNLESLNIEGYKLGSVPTDALSHVHNLLSLRLRYLNITDIRDFSFKRLY
RLRVLEISHMPALNTMASQSLYGLNLTSLSITNCNLSAIPYEAISHLRYLRFLNLSFNPI
HTVEGNRLFNLQKLQAFHLAGGNLVAIEPYSFRGLNHLRILNVSRNHLSTLEESVFHSVG
NLETLALYENPLACDCRLLWVFRRRWRLNFNKQQPICVSPEIVQGKEFKDFPDVLPPDYF
ICQKSKIVDYKVLESHVDEGTTVHFSCEAEGDPAPLIMWLSPKKEYITTKTMGSRLSVSS
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIVATTMGFISFLGVVLFCLVILFLWSRGKDSTKSTIEVEYV
PRKEETEEASPTEAPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaaacagtaggatggtgtctggagaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctgatgctgggcactgtcctttcaggctccacc
actggctgcccttcaaaatgtgactgcaatggccaagagcgttccgttgtctgtcatcga
agaaggctggcagctcttccagagggaattcccactgaaacaaaactactagacctcagc
aaaaatcgtctgaaaactctggggcctgaggaattcattaattatccacagttggaggag
ctgcagctgaacgaaaacaccatttcatcaattgagccaggggcttttagtaacctaatg
aatcttcgaactctaggcttgcgcagcaacgagctgaagctcattcagctaggagtattc
acaggcatggtcaacctcacacagttggatattagcgagaataaaattgtgattttgctt
gattatatgttccaagagctgtacaacctgagggctttggaagttggggacaatgaccta
gtctttatatcaccccgatcatttcatggtcttaccaatcttgaaagcctcaacattgaa
gggtataaattgggctcagttcccactgatgccctcagccatgttcacaacctgctatca
cttcgattacgctatctgaacatcactgacataagggacttctcctttaaaaggttgtat
cgactaagagtactggagatttctcatatgcctgccttgaatactatggcctcacaaagt
ttgtatggactcaaccttacatcgttgtccatcacgaactgcaatctgtctgccatcccc
tatgaagccatcagtcatctcagatatcttcggtttttgaatctatccttcaatcctatt
catactgttgaagggaaccgactcttcaatctacaaaagctccaggcctttcacttggct
ggtggaaatttggtggctattgagccctactcttttaggggtctcaaccacctccgtatt
cttaatgtgtcaagaaatcacttgagcacccttgaggagtctgtttttcattcagtagga
aatctggagaccctggctttgtatgaaaaccctttggcctgtgactgccgcttgctatgg
gtgttccgccggagatggaggcttaactttaacaaacaacagcccatttgtgtttctccc
gagattgtgcaaggtaaagagttcaaagatttcccagatgtactgcctcctgactacttc
atctgccaaaaatcaaaaattgtggattacaaggttctggaaagccatgtggacgaagga
actactgttcacttctcttgcgaggctgaaggtgatccagctccacttataatgtggcta
tcccccaagaaggagtacattactacaaagactatgggatcaagactttctgtatccagt
gaaggtacactggaggtccgctatgcccaaattcaggacaatgggacatacttgtgcatt
gccagtaatgctgctggcaatgacaccaaagctgctcacctttttgtacacagctactcc
cctaattggccccatcagccaaataagacatttgcttttatctctaaccagccaagcgat
gaaggtgctaatgtgaccagagcaacagttccatttccatttgatgtaaagacacttatt
gtggcaaccacaatgggattcatctcatttcttggagtggttctcttctgtcttgtaatt
ttatttctgtggagtagaggaaaagacagcactaagtcaactattgaagttgaatatgtg
ccacgcaaagaggaaacagaggaggccagtccgacagaggcacctgtacaattcaacatg
aaaatcatgtga
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