Cyprinodon tularosa (White Sands pupfish): 119773839
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Entry
119773839 CDS
T07496
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119773839 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119773839 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119773839 (pcdh7a)
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119773839 (pcdh7a)
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Protocadherins
119773839 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119773839
NCBI-ProteinID:
XP_038126948
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MPRLGAVHLVVLLLQLLTQLPAADSALRYRVAEEGPPDVRIGSVATDLGLTAGTGSGDVT
FALESGSEYFKIDNVTGELTTGPRRIDREKLPQCQMIFDENDCFLDFEVSVIGPLQSWVD
LFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGIDRYELIQD
NGAGSSSTRRTVGGNPITRVDGLDRRGRSGDSGGGARSTVFELQVADIPDGEKQPQLIVK
GTLDREQKDSYELILKVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYEAEMTENAPP
GTPVLQVRASDRDIGVNGQVEYVFGAATENVRRLLRLDEATGWLSVLHRIDREEVAQLKF
TVMARDRGQPPRTDRTTVVLAVRDENDNVPVVEIRKIGRILVRDGAALVPENVLVDTPVA
LVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETLLPPPPADEAFDRNKKKYFLHTSALLD
YEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPIFAQSNVEVHFAENNGPGERV
VTVVATDADSGKNAEIAYSLDPGSNGPFYIDADNGDIRATGTLDREQQERYELRVIAKDK
GTPSLQGSATVLVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTDADEGENAEL
SLFVEVDGVGADTKTGEKVEGEDGGNEQEELFSIENNTGTIFSAASFDREKLSTYTFRVR
AVDGGEPRKTATATVSLFVTDENDNAPSITSPANESYTLLPPASSARTIVRTVTAIDSDT
GPNAELHYALVGGNPFRLFEIGQTNGVITLAEPLERRHRGLHRLVVRVNDSGIPSLCATA
LVHVFINESLANATLVDAQVARSLMAPLSLDIAGDPDSERAFGKQRLSVAIGILAGAAAV
ILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPSGAQPQASRGSGSDRGRKPRRDKRG
GGSGSTVGGVGKSDRSLYSGIVTVNGLRRHVNDDDDEELSSASERLAARYCAMEGDPGSP
RMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQELPPSNTFVGSGGCV
GSAGSSSSSTGGSGNADAMSLGSDQCSDYSCQAANKYSKQGTLRRVTFSVVSQPQDGGCY
DSGLEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEDHVENDARQLPDVALTGK
CTRECDEFGHSDTCWMPVRPSPRQRQRHGSDPPRLSTFAPGDDNNNLRGNDRESDSESAG
SAGSSEAGVMVGGEGQRLPMVNGDPLGTLGRGDRNRNMGDHNRNLLNRKMTSASYDTFSG
AGLGRRQPEEEGGEGQNPPEVIPLARTGGDYKTTSCLTLSRREVYL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcttggtgcagtgcacttagtggtgttgctgctgcagctgctgactcagcta
ccggctgcagactcagctctccggtaccgggtggcggaggagggcccgccggatgtcaga
atcggcagcgtggccaccgatctgggcctcacagcgggcaccggcagcggggatgtcacc
ttcgccctggagagcggctctgagtacttcaagattgacaacgtgacaggtgagctgacc
acaggcccgcgacgcatagaccgagagaagctcccacagtgtcagatgatctttgacgag
aatgactgcttcttggactttgaggtgtcagtgatcgggcctctgcagagctgggtagat
ctgtttgaaggcagagttgtcatcacagacatcaatgacaacacgccttccttcccctca
cctgtcctgcagctctctgtggaggaaaaccgccccattggcactctgtacctgctccca
actgccactgacagggattttgggcggaatggcattgatcgctacgagcttatccaagat
aatggagctgggtcaagttcaacaaggcgcacagtaggaggaaaccccattactagagtg
gatggacttgaccgcaggggcagaagtggtgatagtggaggaggagctaggagcactgtg
tttgagctgcaagtagcggacataccagatggtgagaagcagcctcagctcatcgtgaag
ggcacactggatcgagagcagaaggactcatatgagctgatcctcaaagttcgagatgga
ggaaacccacctcgttcctctcaggctctgctccgggtttctatcactgatgtgaatgac
aacagcccacagtttgagaggtccacatatgaagctgagatgactgaaaatgctcctcct
ggtacacctgttctccaggtcagagcttctgatcgagacatcggagtgaatgggcaggtg
gagtacgtttttggagctgccactgagaatgtcaggcgacttctgcgcctggatgaggcc
actggttggctgagtgttcttcacaggattgacagggaggaggtggcgcagctgaagttc
acagtgatggccagggaccggggtcagcctccccggactgaccgcaccacagtggttttg
gctgtgcgggatgaaaacgacaatgttccagttgtagagatcagaaagatcgggcggatt
ctggtccgggatggggcggcactggtgccagagaatgttctggtggacacacctgtagct
ctcgttcaggtgtctgaccgggaccagggggagaatggggcggtgacctgcacggtcgta
ggagatgtcccatttactctgaagccagccggcgaaacgctcctcccacccccacctgca
gatgaagcctttgacagaaacaagaagaagtatttcttacatacgtcagccttgctggat
tatgaggccacaaaagagtacagtgtaaccattgttgcagtagattctggcagtcccagt
ctatccagtaacagctcattgatggtgcgggtggtagacatcaacgatcatgccccaatc
tttgcccagagcaatgtggaggtccactttgctgaaaataatggacctggtgaaagggtg
gtcactgttgtagctacagatgcagacagtggaaaaaatgctgaaattgcatattccttg
gatcctgggtctaacggacccttttacatagatgcagataatggtgatatcagagctaca
gggaccctggaccgggaacaacaagaaaggtatgagttgagagtaattgccaaggacaaa
ggaacaccttctttgcaaggctctgcaactgttcttgtacaggtaactgatcgcaatgac
aatgcaccaaagtttgttcaagagatcttcacattctatgtgaaggagaacctacttgcc
aacagtcctgtcggcatggtaacagtcactgatgctgacgaaggtgaaaatgctgagctt
agcctctttgttgaggtagatggggttggggcagacacaaagacaggggaaaaagtggaa
ggagaagatggcggaaacgagcaagaagagctattctccattgagaacaacaccggaaca
atcttttcagctgcatcctttgaccgtgaaaagctttccacctacaccttccgcgttagg
gccgtggatggaggggagccacgcaaaactgccaccgccactgtctcgctatttgtgacc
gatgaaaacgacaatgcaccttcaataacctctcctgccaatgaatcctacacgctccta
ccacctgccagcagtgcccgcaccattgtcaggactgtaacagccatagactcagacact
ggcccaaatgcagaactccactatgcattggtgggaggaaatccctttagactttttgaa
attggccaaactaatggagtaatcaccctggcagaacctttggagcgacgccacagaggt
ttgcatcgccttgttgtacgagtcaacgacagtggaatcccctccctttgtgcgacggca
ctggttcacgtcttcatcaatgagagtttggcaaatgccaccctagtggatgcacaggtt
gcccgcagcctgatggcccctctgtctctagacattgcaggggacccagacagtgaacgt
gcatttggaaagcagcgcctcagtgttgcgattggcatcctcgcgggagctgcagcagtc
atcctggtgattctccttgtggtaactgccaggcagtgtggcgctcagggtaagaacggc
tatgaggctggtaaaaaagagccagaggaagacttcttcagtccttctggggctcaacca
caagccagcagaggcagtggttccgaccgtggtcggaagccgcgaagagacaagcgtggc
ggaggcagtggcagtacagtcggaggtgtagggaagtcagacaggtctctatacagtggc
atcgtcaccgtcaatggcttgcgtcgccacgtcaatgatgatgatgacgaggaactaagc
agtgccagtgagcgcctagcagctcgctactgtgctatggaaggggaccctggtagccca
agaatgggcggcggcagaagacaccagtcaagcccagatctggccagacactacaaatct
agttcacctctccctgcagtgaatctccagcctcattcacccccagccgagggaaagaag
caccaggcggtccaggagcttcctccctcaaacacctttgtgggcagtggtggatgcgtg
gggagtgccggctccagtagcagcagcacaggaggtagtggcaacgcagacgccatgtcc
ctgggatcagaccagtgctcagattacagctgccaggctgcgaacaagtacagcaaacag
gggacccttcgccgtgtgaccttctcggttgtgagccaacctcaggatggtggttgctat
gacagtggcctagaagactctgagacaccaagcagcaagagttcgtcggggccacggctg
ggagcccttccgcttcctgaggaaggttacgagcgcacaaccccagagggaagcgtaggg
gaggaggaccatgtagagaatgatgcgagacagcttccagatgtagcactaactggaaag
tgcaccagggagtgtgatgaatttgggcactctgacacatgctggatgcccgtccgccct
tcaccacggcaacggcagcggcacggcagcgaccctccacgcctttcaaccttcgcccca
ggtgacgacaacaacaatctccgtggcaatgaccgtgaaagcgacagcgaaagcgccggc
agtgcagggagctcagaggctggagtcatggtgggaggagaaggtcagaggttacctatg
gtcaatggggatccccttggcaccttgggacgtggcgaccgcaacaggaacatgggcgac
cacaaccgaaatcttctgaatcgtaaaatgacttccgcatcctacgacacattcagcggg
gcggggcttgggaggcgccagcccgaggaggagggaggagagggccagaacccacctgag
gtcataccactggcgcggactggaggggactacaagacaacctcctgccttactttatct
cgtcgggaggtctacctgtaa
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integrated database retrieval system
